Pseudoalteromonas xiamenensis: J5O05_09170
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Entry
J5O05_09170 CDS
T07215
Name
(GenBank) response regulator transcription factor
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
pxi
Pseudoalteromonas xiamenensis
Brite
KEGG Orthology (KO) [BR:
pxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pxi03000
]
J5O05_09170
Transcription factors [BR:
pxi03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
J5O05_09170
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
VpsT-like_REC
HTH_23
Sigma70_r4
HTH_10
HTH_24
HTH_40
Sigma70_ECF
HTH_7
HTH_5
PF0610-like_N
Fe_dep_repress
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
QTH70216
UniProt:
A0A975DE89
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All DBs
Position
1890530..1891186
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AA seq
218 aa
AA seq
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MSSSAFLLLEKNPINTIGVNVLQPLLKTQGIDVTAGTDISQVPEGTRLLFIETATDDAWG
KLKEHLVSLKVKCDIVLFNLDENPELANRALLSGIRGVFYTTDNADVLMKGIRLLMENQL
WYRREIMCNVLNRMLQFNKDALHKLTEGDIEPIKLTKREKAIISLMSKGAKNKEIAESLN
ISPHTVKTHLYSAFRKTKCRNRIELLSWAQQNIPDEIR
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttctgcctttttgttactagaaaaaaacccgatcaacacaataggtgtcaac
gttttacaacctttgttgaaaacgcaaggaattgatgtcaccgccggtaccgacatttcc
caagttccagaaggaacccgtttgttgtttattgaaacagcaactgacgacgcttggggg
aaattgaaggagcaccttgtaagcttgaaagtaaagtgtgacatcgtgttgtttaaccta
gatgagaatccagaactcgcaaatcgcgccctgctcagtggtattcgtggtgtgttctac
acaaccgacaacgcagatgtattaatgaaagggatccgcttattgatggaaaatcaattg
tggtaccgccgtgaaatcatgtgcaacgtactaaaccgtatgctgcaattcaataaagat
gcactgcataagttaacggaaggtgatattgaaccaattaagctaaccaagcgtgagaaa
gctattatttcattaatgagtaaaggcgcaaagaacaaagaaatcgccgaatcgcttaat
atcagtcctcataccgttaaaacacatctttacagtgcgtttagaaaaacaaaatgccgc
aaccgtattgagctgctttcttgggcacaacaaaatattcccgacgagatccgttaa
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