Pseudoalteromonas xiamenensis: J5O05_09320
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Entry
J5O05_09320 CDS
T07215
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pxi
Pseudoalteromonas xiamenensis
Pathway
pxi00300
Lysine biosynthesis
pxi00470
D-Amino acid metabolism
pxi01100
Metabolic pathways
pxi01110
Biosynthesis of secondary metabolites
pxi01120
Microbial metabolism in diverse environments
pxi01230
Biosynthesis of amino acids
Module
pxi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pxi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J5O05_09320 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J5O05_09320 (dapF)
Enzymes [BR:
pxi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
J5O05_09320 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
DHODB_Fe-S_bind
Motif
Other DBs
NCBI-ProteinID:
QTH70238
UniProt:
A0A975HJR1
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All DBs
Position
1928158..1928988
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AA seq
276 aa
AA seq
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MLINFSKMHGLGNDFMVVDNVTQNVFLSRDQIKRLADRNFGVGFDQLLFVEPPYSPEIDF
HYRIFNADGNEVEQCGNGARCFARFVRMKGLTNKHKVSVSTKGGNITLFTEKDGQVTVNM
GHPQFDPQHIPMKAGKRENTYIFRLPEQTVFLSSVSMGNPHAVLIVDDVENAPVHELGPT
LELHERFPARANVGFMQVINAEHIRLRVWERGAGETLACGTGACAAAVVGMLQGKLESTV
RVDLPGGSLQIRWQGEGHPVKMTGPAEHVYDGQVAV
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgttaattaatttttctaaaatgcatggtttgggtaacgactttatggtcgtcgacaat
gtcacccaaaatgtatttttatcgcgtgaccagattaagcgtttggcagatcgcaatttc
ggagtagggtttgaccaactgttgtttgttgaacctccttactcacctgaaatcgatttc
cactaccgaattttcaatgccgatggcaacgaagttgagcaatgcggcaatggtgcgcgt
tgttttgcacgctttgtgcgtatgaaaggcctgacgaacaaacacaaagtgtctgtctcc
acaaaaggcggcaacatcaccctatttaccgaaaaagatggccaagttacggtgaatatg
gggcatcctcaattcgacccacaacacattccgatgaaagcgggcaaacgtgagaacacc
tacattttcaggctgccagaacaaaccgttttcctcagttcagtctccatgggtaatcca
catgcagtattgattgtggatgacgtagaaaacgcgcctgtacacgaacttggcccaacg
cttgaattgcacgaacgttttcctgcccgtgcaaacgtaggttttatgcaagttattaac
gctgaacacattcgactacgtgtgtgggagcgcggcgcgggcgagacgcttgcgtgtgga
acgggggcttgtgcggctgcggtcgtcggcatgctgcaaggaaaattagaaagtactgtg
cgtgttgatttacctggtggcagcttacagatccgctggcaaggtgaagggcatccggta
aaaatgactggtcccgcggaacacgtttacgatggacaagttgcagtatga
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