Pseudoalteromonas xiamenensis: J5O05_10105
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Entry
J5O05_10105 CDS
T07215
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
pxi
Pseudoalteromonas xiamenensis
Pathway
pxi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J5O05_10105 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxi03400
]
J5O05_10105 (recF)
DNA repair and recombination proteins [BR:
pxi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
J5O05_10105 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_15
AAA_23
AAA_27
AAA_29
DUF2813
AAA_13
ABC_tran
ATPase_2
nSTAND1
NACHT
Diphtheria_C
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QTH70369
UniProt:
A0A975DF08
LinkDB
All DBs
Position
2094577..2095671
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AA seq
364 aa
AA seq
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MSLSQLSLSQFRNIEAISLEPSEHINVILGANGSGKSSLLEAIYFLSHGKSFRTTNSKLL
IRHEQPQCVVHGKKSLHHLLVPVGISKNQQGESIIKIQGKVARRMSELAQLLPVQVITPE
SYSLFFGGPKERRRFLDLGVFHVEHEFMSAWQQFSQVLKQRNALLKTRPQKYSEQIKYWD
KEFVRLAEVVNRCREAYISRFNDVFFGKIIANLPFGEGLEIRFQSGWKKGEALQNELESH
FERDVKLGYTSKGPHKSDFNFFTKGMSVEQVLSRGQLKLLLYALKITQTDLIESQSKKQS
ILLIDDLPSELSSETIELVARLLQLCQSQLFITAIDEQSIARVVEPMERELKMFHVKHGN
LITR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttagtcagctcagcctttctcaatttcgaaacattgaggcgatttccttggag
cctagtgaacacattaatgtgatcctaggtgccaacggaagcggtaaatcgagtttactg
gaagcaatctattttttgtcgcatggtaaatcgtttcgaacaactaactcaaaattactc
attcgtcatgaacagcctcaatgcgttgtgcatggtaaaaaatctctacatcatctttta
gtgcctgttggtatcagtaaaaaccagcaaggcgagagcatcataaaaatccaaggtaaa
gtcgcgcgacgtatgtcagagcttgcgcagttgttgcctgtacaagttattactccagaa
agctatagcttgttttttggtggcccaaaagaacgtcgtcgttttttggacttgggtgtg
ttccacgtggaacatgaattcatgtcagcgtggcaacagttttcccaagtgttaaaacaa
cgtaatgcgttacttaaaacacgaccgcagaaatattctgaacaaattaagtattgggat
aaagaatttgttagactggcagaggtcgtaaatcgctgtagagaagcgtatattagtagg
tttaatgacgtattttttggtaaaataatagccaacttaccctttggtgaagggcttgaa
attcgctttcaatcaggttggaaaaagggcgaagctctccaaaacgaacttgaaagccac
tttgagcgggatgttaaacttggctatacaagtaaaggcccccacaaaagtgactttaat
ttttttaccaaaggaatgagcgtggaacaggtgttgtctcgcggtcaacttaagcttttg
ctttacgctttaaaaataacacaaactgacttaatagagtcgcaaagcaaaaagcagtcg
attcttttaatcgatgatttaccatctgaactaagttcagaaacaatagaattagtagca
agactactgcagctttgtcagtctcagctatttataacagccattgatgagcaaagtatt
gcacgtgttgtggaacccatggaacgtgaactgaaaatgttccacgtgaaacatggcaac
ctaataacaagataa
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