Pseudoalteromonas xiamenensis: J5O05_11465
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Entry
J5O05_11465 CDS
T07215
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pxi
Pseudoalteromonas xiamenensis
Pathway
pxi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pxi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
J5O05_11465 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxi03019
]
J5O05_11465 (orn)
03009 Ribosome biogenesis [BR:
pxi03009
]
J5O05_11465 (orn)
Messenger RNA biogenesis [BR:
pxi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
J5O05_11465 (orn)
Ribosome biogenesis [BR:
pxi03009
]
Eukaryotic type
Pre-60S particles
RNases
J5O05_11465 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DUF7351
Motif
Other DBs
NCBI-ProteinID:
QTH70573
UniProt:
A0A975DEY4
LinkDB
All DBs
Position
2370487..2371032
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AA seq
181 aa
AA seq
DB search
MSFHESNLIWLDLEMTGLEPETDKILEIGTVVTDGDLNVLAEGPVIAIHQSDELLDNMDE
WCINQHGRSGLTARCKASTYTEADAIKETLDFLKHWVPPGKSPMCGNSIGQDRRFLVKYM
PELEAYFHYRNIDVSTIKELARRWKPELLTQVKKKSSHLALDDIKDSIMELKVYQEKFFK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcatgaatcaaatctgatctggttagatctcgaaatgactggcctagagcca
gaaaccgataaaattttagaaattggtacagttgtaaccgatggcgacctcaatgttttg
gcagaaggtccggttatcgctatccatcaaagcgacgagttgcttgataatatggatgag
tggtgtatcaatcaacatggccgctcaggtttaactgcacgctgcaaagcgtcgacctat
actgaagctgacgctataaaagaaacattagatttccttaaacattgggttcctcctggt
aagtcacctatgtgtggtaactcaattggtcaagatagacgctttttggtgaagtacatg
ccagaacttgaagcgtacttccattaccgaaatattgatgtaagtaccattaaagaactt
gcacgtcgttggaaaccggaattgttgacgcaagtaaagaagaaaagttctcatcttgct
ttagacgatatcaaagattccattatggaattgaaggtttaccaagaaaagttcttcaaa
ctgtaa
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