Pseudoalteromonas xiamenensis: J5O05_12350
Help
Entry
J5O05_12350 CDS
T07215
Name
(GenBank) PLP-dependent decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pxi
Pseudoalteromonas xiamenensis
Pathway
pxi00300
Lysine biosynthesis
pxi00470
D-Amino acid metabolism
pxi01100
Metabolic pathways
pxi01110
Biosynthesis of secondary metabolites
pxi01120
Microbial metabolism in diverse environments
pxi01230
Biosynthesis of amino acids
Module
pxi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pxi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J5O05_12350
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J5O05_12350
Enzymes [BR:
pxi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
J5O05_12350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QTH70709
UniProt:
A0A975DFP3
LinkDB
All DBs
Position
complement(2551780..2552985)
Genome browser
AA seq
401 aa
AA seq
DB search
MTFLSAPVRETLVSLCHEQETPFFVYDLDRLSQHLQLLTKQDIVKLWYAVKANPLSEIIK
CLDQAGFDFDVASSGELEQVIAQGVDATRVLNTGPAKSKRQIQHFLKRGVTTFVAESINQ
VRWLQEAAVDHHVNLRVLLRVQLRWPEGEKNPLGGDTLTPFGLGVEEWQHLNLKDYSHLN
FVGLHIFQWGNMLSTDKLASLWQAMVGPLQQLSHRLGMQLDVLDLGGGLGIPYTSDAEHL
DWQVLLTALDNIKDAIGVKELWMELGRYAVGECGYYANPVVEQKTNYGVKQLIVSGGVNH
LLRPAVTGQAFPCERLRQDDTSFAQFAIHGPLCTALDSLGSHSLPDNTDETDWLVFSQCG
AYGFTESMPYFLCHELPAEYVIQQGKVQCVRQAESAQYYLR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcttgagtgcgcctgttcgcgaaacgttagtctctctgtgccatgaacaagaa
acacccttttttgtttatgatctggataggctgagccagcatcttcaattgctgacgaaa
caagacatcgttaagttatggtatgccgttaaagcgaatccactgtctgaaatcatcaaa
tgtctggatcaagcggggtttgattttgatgttgcaagcagcggtgagctagagcaggtc
attgcacagggtgtcgacgcgactcgcgtactcaacacgggaccggctaaatcaaaacgc
caaatccaacactttcttaaacgtggtgtgaccacgtttgttgctgaaagtatcaatcaa
gtgcgctggttacaagaagcagctgttgatcaccatgtgaacttacgtgttttactgcgt
gttcagttacgctggcctgaaggcgaaaaaaatcctcttggcggggatacactcacccct
tttggtttgggtgttgaagaatggcaacatttgaaccttaaagactactctcacttgaat
tttgttggtctccatatttttcaatggggcaacatgctctcgacggataaactcgcttca
ctttggcaagcaatggtggggccattgcaacaattgtcacaccgtttaggcatgcaactc
gacgtgcttgatttgggcggcggattggggatcccctatacttctgacgctgaacacctt
gattggcaagtactcttaactgctcttgataacataaaagacgctattggtgttaaagag
ttatggatggaattgggtcgctatgctgtcggtgaatgtggatattacgctaaccctgtg
gttgagcaaaaaaccaattacggcgtaaaacaactcatcgtctctggcggtgtaaatcat
ttactgcgcccagcagtgacgggacaggcatttccgtgcgaacgccttcgtcaagacgat
acatcattcgcccaattcgccattcatggaccactttgtactgcactggatagccttgga
agccattcgcttcctgacaacactgacgaaaccgattggcttgttttcagccaatgtggt
gcctatggctttaccgaaagcatgccctactttctgtgccatgagttgcccgctgaatat
gtgattcagcaaggaaaggtgcagtgtgttcgtcaggctgagtcagcccaatactatttg
agataa
DBGET
integrated database retrieval system