Pseudoalteromonas xiamenensis: J5O05_12605
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Entry
J5O05_12605 CDS
T07215
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pxi
Pseudoalteromonas xiamenensis
Brite
KEGG Orthology (KO) [BR:
pxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pxi03016
]
J5O05_12605
Enzymes [BR:
pxi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
J5O05_12605
Transfer RNA biogenesis [BR:
pxi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J5O05_12605
Prokaryotic type
J5O05_12605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QTH70747
UniProt:
A0A975DGM6
LinkDB
All DBs
Position
2616404..2617429
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AA seq
341 aa
AA seq
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MLTLNYLYGKPTATAEFKTLPEDFVVDEVMDIEFTGEGEHVCLQIIKRGENTISLAKAIA
KAAGVGLRDVSYAGLKDKHGVCTQWFSVPVAIKKDIDFSLLNNEQRMVIQQLRHNRKLRT
GCHKGNRFEITLRNVSDIRAILARINAVRQGVPNYFGEQRFGFDGHNLTMAERMFDGEVI
RDKKLRGLVISAARSALFNHVVSKRVEAHGLAVSWPREIFLLEGSNAFFEEDLSDANVAR
LLEGDIHLSAPLFGKGDRGIVEQERHWLESYQKWCEGLCQLGLKMERRALRLVPQNFTVE
SVNETTLKLGFELPKGTFATAVLRELALYQDVSKVISEEIE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgttaacgcttaactacctttatgggaaaccgactgccacggctgagtttaagaccttg
ccggaagattttgtggtggatgaggtcatggacattgagtttaccggtgaaggtgaacat
gtgtgcctgcaaatcatcaaacgaggtgaaaacaccattagtcttgcaaaagcaattgct
aaagcggcaggtgtcggccttcgtgatgtaagttatgctggactcaaggataaacacggt
gtttgtactcagtggtttagcgtacctgtcgcaattaaaaaagacatcgattttagtttg
ttgaacaatgaacaacggatggtgatacagcaactcaggcataatcgtaagttgcgtacg
ggatgccacaaaggtaatcgatttgaaattacgttgcggaatgtatctgacattcgcgct
attctggctcgaataaacgcggttaggcaaggtgtgccaaattattttggtgaacagcgt
tttggctttgatggccacaatttgacgatggcagagcggatgttcgatggagaagtgatc
cgcgataagaaactccgaggattggtgatctctgcggcccgctcggcattatttaatcac
gttgttagtaaaagagtggaagcgcatgggcttgctgtcagttggccgagagagattttt
cttcttgaaggaagtaacgccttttttgaagaggatttaagtgatgcaaatgtcgcacga
ttattggaaggtgatattcatttatcagcccccttgtttggtaaaggagacagaggcata
gtagaacaagaacgccactggcttgaaagctatcaaaaatggtgtgaaggactgtgtcaa
cttggattaaaaatggaacgtcgtgctcttcgcctagtaccgcaaaattttaccgtggaa
tcagtgaatgaaacgacgttgaagctaggctttgagttaccaaaaggcacattcgcaaca
gcggttttaagagagcttgcgctctatcaagatgtcagcaaagtaatcagcgaggagatt
gagtaa
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