Pseudoalteromonas xiamenensis: J5O05_12795
Help
Entry
J5O05_12795 CDS
T07215
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pxi
Pseudoalteromonas xiamenensis
Brite
KEGG Orthology (KO) [BR:
pxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxi03021
]
J5O05_12795 (rpoH)
Transcription machinery [BR:
pxi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J5O05_12795 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_25
Sua5_C
Motif
Other DBs
NCBI-ProteinID:
QTH70776
UniProt:
A0A975DI85
LinkDB
All DBs
Position
2664123..2664989
Genome browser
AA seq
288 aa
AA seq
DB search
MGNDLYAMALTTGQQSASLEGYVHAVSTIPMLDAEKEKALATRLHEEGDLDAAKQLIMSH
LRFVVHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKARRKLFFNLRKNKKRLGWFNQEEVTTVANELGVSEREVREMESRMSG
QDMGFDLTSDEDEGSSTSGAFSPVQYLTDGNGDLADAVEEEQWQEQSHNRLFSALKTLDE
RSQDIIAARWLDDNKATLQELAEKYQVSAERVRQLEKTAMKKLQQAMV
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacgatttatatgcaatggcacttacaactggacagcaaagcgcgagtttagaa
ggctacgtacatgcggttagcactattccaatgctcgatgctgaaaaagagaaagcgcta
gccactcgccttcacgaagaaggggatttggatgcagctaaacagcttatcatgtctcat
ctcagatttgtggtgcatatcgctaaaagctattctggctacggcctgccacaagctgac
ttaattcaagaaggtaacatcggcctgatgaaagcagtgaaacgcttcaacccagaagtc
ggtgttcgcttggtttctttcgcggtacattggattaaagctgaaatccatgagtacgta
ttgaaaaattggcgcatcgttaaagttgctacaaccaaagcgcgacgtaaattgttcttc
aacttacgtaaaaacaaaaagcgtctaggttggttcaaccaagaagaagtgactaccgtt
gctaatgaactgggtgtgagtgagcgcgaagtacgtgaaatggaatcgcgtatgagtggt
caggacatggggtttgaccttacgtctgatgaagatgaaggcagctcaacaagtggtgca
ttctctccagtacaataccttaccgatggtaacggtgatttagctgatgcagtagaagaa
gagcaatggcaagaacagtctcacaaccgtttgttctctgcacttaaaacacttgatgaa
cgttcgcaagacattattgcggcacgttggttagatgataacaaagcgacgctacaagaa
cttgcagagaaatatcaagtttcggctgagcgagttcgccagctagagaaaaccgcgatg
aaaaagttacagcaagcaatggtgtaa
DBGET
integrated database retrieval system
