Pseudoalteromonas xiamenensis: J5O05_14140
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Entry
J5O05_14140 CDS
T07215
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pxi
Pseudoalteromonas xiamenensis
Pathway
pxi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J5O05_14140 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxi03400
]
J5O05_14140 (recO)
DNA repair and recombination proteins [BR:
pxi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
J5O05_14140 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
J5O05_14140 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
QTH70995
UniProt:
A0A975DG14
LinkDB
All DBs
Position
2949140..2949814
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AA seq
224 aa
AA seq
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MDSDFARAYLLHRRPVSDSQVMLNVVVEGVGHIKMLARIKGKQQLKHNAQLQPFFPLLCR
YAGRHDMKYLNQFELLTLGNAMQGRRLYCGFYMNELSYRLMPINEPLEGAFELYQSHLSR
LQNGEELEIVLRSYEFELLNLLGFGIEFDYDADGNSVNPKLTYRYVAECGFVQSAYGYRG
QVLLNIAQHDYEPIETRQQAKRLSREVLRPLLGYRDLKSRELFI
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
ttggacagcgatttcgctcgcgcctatttgttgcatcgaagacctgtgagtgactcacaa
gtgatgctcaatgtagtcgttgagggagtcggacatattaagatgcttgcccgtatcaag
ggcaagcaacaacttaaacataacgcgcaactccaaccttttttcccgctactttgccga
tatgcaggtcggcatgacatgaaatacctcaatcaattcgaacttctcacacttggtaat
gcaatgcaggggagacggctctactgcgggttttacatgaatgaactgagttatcgatta
atgcccataaacgagccattagaaggggcattcgaactctatcaaagccacctttcccga
ttgcaaaatggcgaagaattagaaattgtattacgcagttatgaatttgaattgttgaac
ttacttggtttcggcatcgagtttgattatgatgctgacggaaattctgttaacccaaaa
ttaacgtatcggtatgtcgctgaatgtggctttgtacaaagtgcttacggctatcgcggg
caggtattgttgaacatcgcccaacatgattacgagccgattgaaacacgccaacaggca
aaacgtttgagccgtgaggttttacgtcctttgttgggctatagagatttaaagagtcga
gagctgttcatttaa
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