Pseudoalteromonas xiamenensis: J5O05_14535
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Entry
J5O05_14535 CDS
T07215
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pxi
Pseudoalteromonas xiamenensis
Pathway
pxi02020
Two-component system
pxi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pxi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J5O05_14535
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J5O05_14535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pxi03000
]
J5O05_14535
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pxi02035
]
J5O05_14535
Transcription factors [BR:
pxi03000
]
Prokaryotic type
Helix-turn-helix
Other families
J5O05_14535
Bacterial motility proteins [BR:
pxi02035
]
Flagellar system
Flagellar assembly proteins
Others
J5O05_14535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
Mg_chelatase
AAA_16
AAA_7
AAA
MCM
TIP49
Motif
Other DBs
NCBI-ProteinID:
QTH71058
UniProt:
A0A975DFY5
LinkDB
All DBs
Position
3030833..3032287
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AA seq
484 aa
AA seq
DB search
MILIIDNNNNRASGLCASLTFVGEKVQLVEENASLPQVKDDQDGIIVILGALNRVDHEQL
IKSNPAVPFLLIGETLRPLLSLPNVIGLMAEPFSHEVTNQLLHDCQQYVRLMPGKADKSN
AKAFDGLVGETPAVQNVRFLIEQVSKTDANVLILGESGTGKEVVARNVHLLSRRREGPFV
PVNCGAIPGELLESELFGHEKGAFTGAISARKGRFELAQGGTLFLDEIGDMPLQMQVKLL
RVLQERSYERVGGSKSIQADVRVIAATHRNLEDMIESGKFREDLYYRLNVFPIENPSLSE
RADDITLLLKELTRRVSEMSGTSVKFTERAIESLKIHSWPGNIRELSNLVERMVIMFPDK
VVDVSDLPRKYQHIEVEAFEPEYPEELLERNAFIDIFSDGFSDYDVDAVDVDEVEASASI
GGYPADMLPDEGIDLKEYLADLEISLITQALERYDYVVARAAEILGVRRTTLVEKMKKYN
LGRD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgattttgataatagataataataacaatcgagcttccggtctgtgtgcttcccttacc
tttgttggggaaaaagtgcagttggttgaagaaaacgcctctttgccacaagtgaaagat
gatcaggatggcatcatcgtcattcttggcgcacttaatcgtgtcgatcatgaacagtta
atcaaatcgaatccagcggttccgtttttactgattggcgaaacgctacggccccttttg
agtttacccaacgttattggtttaatggctgagccatttagccatgaagttacaaatcaa
cttttgcatgattgccagcagtatgttcgtctaatgcctggcaaagcagataaaagtaat
gctaaagcatttgatggattagtgggtgaaacgccagcagtgcaaaatgtacgtttcttg
atcgagcaggtctctaagaccgatgcaaacgtgcttattctgggtgaatcaggcacaggt
aaagaagtcgttgcgcgcaacgtacatttattgtctcgccgtcgtgaaggaccatttgta
ccggtaaactgtggcgctattcctggtgaacttttagaaagtgaattattcggtcatgag
aaaggtgccttcacgggggcaatttcggctcgcaaaggccgttttgaattggcccaaggt
ggtaccctgtttctagatgaaattggtgatatgccactgcaaatgcaagttaaattatta
cgagtattgcaagagcgcagctacgagcgtgttggtggttctaaatccattcaagccgat
gttcgcgttatcgcggcaacgcaccgtaatcttgaagacatgattgaaagcggaaaattc
cgggaagatttatactatcgccttaatgtttttcctattgaaaacccatccttatctgaa
cgcgcagacgatataactttgcttctgaaagagctgacgagaagagtcagtgaaatgagt
ggtacgagtgtcaagtttacagagcgtgccatcgagagtttaaaaattcactcttggcct
ggcaatattcgtgaattgtcgaatttggttgagcgaatggtgattatgtttcctgataaa
gtggtcgatgtatccgatttgccccggaaatatcagcacattgaagttgaagcatttgag
ccagaatacccagaggaattactcgagcgtaacgccttcatcgatatattcagcgatgga
tttagtgattacgatgtagatgctgtcgatgtggatgaagttgaagcatccgcttcaatc
ggtggttaccctgcagatatgctgcctgatgaaggtattgatcttaaagagtatttagcc
gatttggaaattagccttatcacgcaagcgcttgagagatacgactatgttgtagcgaga
gccgccgaaattctcggtgtgcgcagaacgacccttgttgaaaaaatgaaaaagtataac
ttgggaagggattaa
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