Pseudoalteromonas xiamenensis: J5O05_16700
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Entry
J5O05_16700 CDS
T07215
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pxi
Pseudoalteromonas xiamenensis
Brite
KEGG Orthology (KO) [BR:
pxi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pxi01011
]
J5O05_16700
Enzymes [BR:
pxi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
J5O05_16700
Peptidoglycan biosynthesis and degradation proteins [BR:
pxi01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
J5O05_16700
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM3_NFP
LysM_RLK
LysM_OapA
LysM2_CERK1_LYK3_4_5
LPAM_MltD
DUF3071
Motif
Other DBs
NCBI-ProteinID:
QTH71395
UniProt:
A0A975HMR7
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All DBs
Position
complement(3445067..3446641)
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AA seq
524 aa
AA seq
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MSKSPLIVLLAAILAGCQMSPDQAQLDNSSKNLTFASPQDVSDALMASEEVTEEEEPAPV
FDDVWERIRYQLSIPVPQNRPVVAERNYYQAHQAYLDRIAKRAEPYLYFIVEEVEKREMP
IEIALLPIVESAFDPFGFSHASASGIWQFMPVTGERFQLKQNWWFDGRRDIVQSTRAALD
YLSYLHKTLEGDWLNAIAAYNSGEGRLLNAIRKNRKKHLPTDFWSLDLPRETTAYVPKLL
ALSDLLRRQDEFSVKWNPIINAQVVDTVDIGGQIDLALATDMAEVSLTELYRLNPGFNRW
ATDPDGPHVLLLPIDKVDAFNEKLAKTELKDRLRWQYYQVAKGDSLSVIAKKFSTSPSAI
QKLNNLDNNIIRIGQQLLVPLSEGALQSEHLPNAVRVAANKVTQEKVTHVVKSGDTLWDI
SREYDVTVKELARWNKLRDSAVLRLGQKLTVFKDTKTAAQQPSENLQSVNRTITYKVRRG
DSLARIASKFNLTVDEIVKWNNLEGQKYLQPGQKLKLKVDVKRT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcccctcttattgtattactagcggctattttggctgggtgtcaaatgtca
cctgatcaagcgcagctagataattcttcaaagaacttaacctttgcatcaccgcaagat
gtatcggatgccttgatggcatcggaagaagttacagaagaagaggaacccgctccagta
tttgacgacgtgtgggaacgtattcgctaccagttatccatcccagttcctcaaaatcgc
cctgttgttgcagaacgaaactattatcaagcacaccaagcgtacctagatcgcatcgcg
aaacgcgcagagccttatctgtatttcatcgttgaagaagttgaaaagcgtgaaatgccg
attgaaattgcgctattaccaatcgtcgaaagtgcattcgacccgtttggtttttcgcac
gcaagtgcatctggtatttggcagtttatgcctgtaacaggcgaacgttttcagttgaaa
caaaactggtggtttgatgggcgtagagacattgtgcaatcaactcgtgctgcgctcgac
tatttaagctatttgcataaaacgctggaaggcgactggttgaatgcgattgctgcatac
aactctggcgaaggccgcctgcttaacgctattcgaaaaaaccgtaaaaaacacttaccc
actgatttctggtctttagatttgccaagagaaacaacggcatacgtcccaaaattacta
gccttgtcagatttactaagacgacaagacgagtttagcgtgaagtggaacccaataatc
aacgcacaggtcgtcgatactgtcgatattggtggccaaattgatttagcgctcgcgacg
gatatggcagaagtttctttaacagaattataccgcttaaacccagggttcaatcgctgg
gcaacggacccggatggcccgcacgttttgttacttcctatcgacaaagtggacgccttt
aatgaaaaattggccaaaaccgagcttaaagaccgtttgcgttggcaatactatcaagta
gcgaaaggtgatagtttgtcagtgattgcgaagaagttttcaacctcaccgagcgcaatc
cagaagctgaataacctcgacaacaatatcatccgaattggtcaacaattgttagtgcct
ctgagcgaaggcgctctgcaaagtgagcatttaccgaatgcagttcgtgtcgccgcaaac
aaagtcacgcaagaaaaagtgactcatgtcgtgaaaagtggcgatacgctttgggacatc
agccgcgagtacgatgttacagtgaaagagctagcacgttggaataaattacgtgactct
gcagtattgcgtttgggtcaaaaactcaccgtatttaaagacactaagacagcagctcaa
caaccgtcggaaaatttgcaatcggtaaaccgcacgatcacatacaaagtgcgacgtgga
gattctttagcgcgaatcgcgagtaagtttaatctcactgtcgatgaaattgtgaagtgg
aataatttggaaggtcagaagtacctacaacctggccagaaattgaaattaaaagtcgat
gtaaaaagaacctaa
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