Pseudoalteromonas xiamenensis: J5O05_17495
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Entry
J5O05_17495 CDS
T07215
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pxi
Pseudoalteromonas xiamenensis
Pathway
pxi03420
Nucleotide excision repair
pxi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pxi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J5O05_17495
03430 Mismatch repair
J5O05_17495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxi03400
]
J5O05_17495
Enzymes [BR:
pxi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J5O05_17495
DNA repair and recombination proteins [BR:
pxi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J5O05_17495
MMR (mismatch excision repair)
Other MMR factors
J5O05_17495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
Viral_helicase1
AAA_30
Glucosaminidase
Motif
Other DBs
NCBI-ProteinID:
QTH73038
UniProt:
A0A975DJR2
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All DBs
Position
unnamed4:67208..68896
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AA seq
562 aa
AA seq
DB search
MDQRQCFKLEAGAGAGKTYSLIESLKYLISLRANEFVVSGKQVACITYTNVAKEEIKART
DNNPLIFADTIHAFSWSVLQNYQEQLRQLIPTLGANWQERIEESAGIGNQTVKYDLGFAS
IKEHEISLYHDDVVALMARMLAFPKFQKLLKSRFPIIFIDEYQDTDSALAKSIVQNLIDN
DSGIVVGLFGDHWQKIYGSSACGLIQSSAGKIIEIGKRANFRSDKNIVECLNRMRPELPQ
SESDSSSTGTIKVYHSNNWQGTRRTGGHWKGDLPEEESRQFIQQTKSLMVEYGWDFSLSK
NKMLFLTNNLIATEQKFKTLADCFRYSEDYLKKNDKYIEFFVDTVELTAQAFQQRKYGEL
LQIKKKNRSFLTSQADKTAWTENLEELMRLRDTSTIGDVLDLLITTSMPRVPAKVADSEV
RYKTLSARDQDSLEPDELSFFDKIRRLRAVSYSEVINLAEYINDKTPFSTKHGVKGAQFD
NVLVVCGRGWNHYNWDQMLEWIEDGVPKGREETFERSRNLFYVSCSRAKHDLTLLFTQHL
SDKSLTALGKIFGHENIKGSPF
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
attgatcaaaggcaatgtttcaaattggaagccggtgctggagcggggaaaacctattcg
ttgatagagtcgctcaagtatctgatttctttacgtgcgaatgagtttgtcgtatctgga
aaacaggttgcatgtatcacttatacaaacgtggccaaagaagagatcaaagcaagaacc
gataataatccattaatttttgcggatacgattcatgccttcagttggagtgttttgcaa
aactaccaagagcagttgagacaacttatccctacgcttggagcaaattggcaagagaga
attgaagaatcggcagggattggtaatcaaacggttaagtacgatttaggttttgcatcg
attaaagaacatgaaatttctctctatcatgacgacgttgtcgcgttaatggctcgtatg
ttggcgttccccaaattccagaaattactgaaaagcagattcccaattatttttattgat
gaatatcaagatactgatagcgcacttgccaaaagtatcgtgcaaaacctgattgataat
gactcaggaattgttgttggtctttttggtgaccactggcaaaaaatttacggctcgtca
gcctgtggattgatacagagttctgcaggaaaaatcattgagatcggcaaacgagccaat
tttcgttctgataaaaatattgttgaatgcctgaatcgtatgcgcccagaattacctcag
tctgaatcagactccagctccacaggaaccataaaggtataccattcaaataattggcag
ggtacacgccgaaccggcggtcattggaaaggcgatcttccagaagaagaatctagacaa
tttatccagcaaaccaaatcattaatggttgagtatggttgggatttttcgttatctaaa
aacaaaatgttgtttttgacgaataacttgatagctaccgaacagaaatttaagactttg
gctgattgtttccgatattcagaagactacctgaagaaaaatgacaaatacattgagttc
tttgttgatacagtcgagttaacggcgcaagctttccagcaacgtaagtatggtgaatta
cttcagattaaaaagaaaaaccgctcctttttaacgtcgcaagctgacaaaactgcttgg
actgagaatttagaagaattaatgcgacttagagacacatctacaatcggtgatgtttta
gacctgttgataactacgagtatgccgagagtaccggcaaaagtcgcggattctgaggtc
cgctataaaacactatctgcccgtgaccaagactcattggagccagatgaattaagtttt
ttcgataaaattaggcgtcttcgcgctgtgtcttactctgaagtaataaatttggctgag
tacataaatgataaaacaccgttttcaaccaagcatggagtaaaaggcgcccagtttgat
aatgtactagtagtttgcggccgtggttggaatcactacaactgggatcaaatgcttgaa
tggatagaagacggtgtcccaaaaggaagagaagagacttttgaacgaagtagaaacttg
ttttatgtcagttgttctagggcgaaacatgaccttacgctcctctttacccagcacctc
tctgataaatcacttactgcccttggtaaaatctttgggcatgaaaatatcaaaggcagc
ccattttaa
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