Pseudoalteromonas xiamenensis: J5O05_20165
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Entry
J5O05_20165 CDS
T07215
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pxi
Pseudoalteromonas xiamenensis
Brite
KEGG Orthology (KO) [BR:
pxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxi03400
]
J5O05_20165 (phrB)
Enzymes [BR:
pxi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
J5O05_20165 (phrB)
DNA repair and recombination proteins [BR:
pxi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
J5O05_20165 (phrB)
Prokaryotic type
J5O05_20165 (phrB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QTH73127
UniProt:
A0A975DK00
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All DBs
Position
unnamed5:543148..544539
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AA seq
463 aa
AA seq
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MKALFWFRRDLRLYGNEALIEAVQSGARDALFFVSKKQWEIHDAAPIQIDMALRRVAELG
KMLAQYGISLHVIEAPLFSDQITSLCSLVEQHKFKQVYANAEYEINERARDKSIAHALES
GGVGFRLFDGDVIAKPGSIRTGSGEMFKVFTPFKNAWLKANFDFHAIYNVWPLSENPINW
ATPDTLMSDGTSAKWPIDDQTLRMITEAFIDEKLVTYKEKRDFPAIKGTSGLSPYLALGI
VSVKQLLGAIQSKFPDILQQTGRPEFCWINELVWREFYRHLIVEWPHLCKHRNFNNKYDY
VSWRDDDESFRLWCEGKTGYPLVDAAMRQLNQTGWMHNRLRMVVASFLTKHLLIDWRWGE
HYFMRHLIDGDLASNNGGWQWAASTGCDAQPYFRIFNPITQSEKFDPKGDFIRKYIPELQ
AVPDKYIHFPHDYLALMKDIDYPKPIVDHKAARERALLAFKVE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctttgttttggtttcgtagagatttgagactctacggaaacgaggcgcttatc
gaagcggttcaatcaggcgcgcgagacgcgcttttttttgtaagtaaaaaacagtgggaa
atccatgacgcagcgccaattcaaatagacatggcactgcgccgcgttgctgaacttgga
aaaatgctcgcgcaatatggtatttcgttgcatgttattgaagcgcctttgttctcagat
caaatcacctctctttgtagtttggtagaacaacacaaattcaaacaggtttatgccaac
gctgaatatgaaatcaatgagcgagcaagggataaatctattgcgcatgctttggaaagc
ggaggtgtcggatttcggttattcgatggtgatgtgattgcaaaaccagggtcaattcgt
acaggttctggcgaaatgttcaaagtattcacgccattcaaaaacgcatggcttaaggct
aattttgactttcatgcaatttacaatgtctggccgctttctgagaaccctataaactgg
gctactcctgatactttgatgtcagatgggacgtcagcgaaatggccgatagacgaccaa
accctgcgaatgattacggaagcctttattgacgagaaattggtaacctacaaagaaaag
cgagattttcctgcgataaaaggaacatctggattaagcccttaccttgcgcttgggatc
gtgtctgtaaaacagttacttggtgcaatccaatcaaaatttcctgatattttgcagcaa
acggggcgaccagaattttgttggataaacgaattggtttggcgtgaattttaccgacat
ttgattgttgagtggccacacctttgtaagcatcgtaatttcaacaataagtacgattac
gttagctggcgagatgatgacgaatcctttaggttatggtgcgaaggtaaaactggctat
ccactcgtcgatgcagcgatgaggcagttgaaccaaactggctggatgcacaacagactg
cggatggtcgtagcaagttttctcacaaaacacttactcatcgattggcgatggggagag
cattattttatgcgtcatttgattgatggagatctggctagcaataacggcggttggcag
tgggctgcgagtacaggttgtgatgctcagccctatttcagaatatttaacccgataaca
caaagtgaaaaatttgatcccaaaggcgatttcattcgtaaatatattcctgaattacaa
gcggttccggataaatacatacactttcctcatgactacctagccttgatgaaagacatt
gattatccaaaaccaatagtcgatcacaaagcagctagagagcgagctttattagcattt
aaggttgagtaa
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