Paenibacillus xylanexedens: BS614_05200
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Entry
BS614_05200 CDS
T04676
Name
(GenBank) transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
pxl
Paenibacillus xylanexedens
Brite
KEGG Orthology (KO) [BR:
pxl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pxl03000
]
BS614_05200
Transcription factors [BR:
pxl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BS614_05200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_28
HTH_24
HTH_20
GerE
HTH_23
HTH_5
Motif
Other DBs
NCBI-ProteinID:
APO43468
LinkDB
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Position
complement(1138718..1139644)
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AA seq
308 aa
AA seq
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MNLIKLQIVELIDKHHHMTSVAELLGIKQPTVTFHMKSLEEEMGVRLFESRSGKTFLTEA
GQALLHYSVKINALTQEARRIVKEYDSLYRGTLHIGASYVPATYLLPAIFNTFSQEFPGI
RIILSVKPSPVIREMLIRHQIDLGVISSEPFVGPALQAETLCEDDLVLICSPQHGLAQKD
ALTPDHIAQIPFALHGNESSTRRLTNQWLAQHDIRLRSTVEMDSLEAIKQLVLIGGHVSF
MSRMAVQWEEQHGLIQVLPIPGEQAPRHIYTVHNKDRHPSVQVNRFKEVLREVSHGSPLS
MADCPDPL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
ttgaatctgatcaaattgcaaattgttgagctgatcgacaagcatcatcacatgacaagc
gtggccgagttactggggatcaaacaacctaccgttacatttcatatgaagtcattggag
gaagagatgggtgtgcgattatttgaatcgcggagtgggaagacttttttaaccgaggcc
ggacaggctttgctccactattctgtcaaaatcaatgctctgacccaagaggcaaggcgg
atcgtaaaggaatatgacagtctctatcggggcaccctgcacattggagcaagctatgta
ccggctacatatctgctgcctgccatattcaataccttttcgcaggaattcccgggcatt
cgtatcatcttatccgtcaaaccatcacctgttattcgcgagatgttgattcgacatcag
attgatctgggggtgatctcttccgagccatttgttggacccgcactgcaagctgagacg
ttgtgtgaagacgacctggtattgatctgttctccgcagcatgggttggcccagaaggat
gcattaacccctgatcatatcgcgcagattccttttgccctacacggcaatgaatccagt
actcgtcggttaaccaatcaatggcttgcgcaacatgatattcgtttgcggagtaccgtg
gagatggattccctggaagcgatcaaacagctcgtgttaatcggggggcatgtctcattc
atgtctcggatggcggtacagtgggaggaacagcacgggctcattcaagttcttcccatt
ccgggagagcaagcgccgcgccatatctatacggtacataacaaggaccgccacccttca
gttcaggtaaaccgcttcaaagaagtgctacgagaggtgagtcacggctcccccctttct
atggctgattgccctgatccgctataa
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