Paenibacillus xylanexedens: BS614_09260
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Entry
BS614_09260 CDS
T04676
Name
(GenBank) integration host factor
KO
K03530
DNA-binding protein HU-beta
Organism
pxl
Paenibacillus xylanexedens
Brite
KEGG Orthology (KO) [BR:
pxl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxl03032
]
BS614_09260
03036 Chromosome and associated proteins [BR:
pxl03036
]
BS614_09260
03400 DNA repair and recombination proteins [BR:
pxl03400
]
BS614_09260
DNA replication proteins [BR:
pxl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BS614_09260
Chromosome and associated proteins [BR:
pxl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BS614_09260
DNA repair and recombination proteins [BR:
pxl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BS614_09260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
DUF2267
DUF937
DUF979
Drf_DAD
Motif
Other DBs
NCBI-ProteinID:
APO44173
LinkDB
All DBs
Position
complement(2119952..2120224)
Genome browser
AA seq
90 aa
AA seq
DB search
MDKEQLITEVAKAGGFSKKNAEKAVTVVLDSILEALKEGKEVQVVGFGKFEVQKREARTG
KSRRTGKEIQLPAGKVPVFTAGLSMKEALN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggataaagaacaattgatcacagaagtagccaaggctggcggtttctccaagaagaat
gctgaaaaagctgtaaccgttgtattggattcgattctcgaagctctcaaagaaggtaaa
gaagttcaagtggttggatttgggaaattcgaagtacagaagcgtgaggcaagaacagga
aaaagtcggagaacaggcaaggaaattcaactacctgcaggtaaagttcctgtattcaca
gcaggcttaagcatgaaagaagctttaaattaa
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