Paenibacillus xylanexedens: BS614_10455
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Entry
BS614_10455 CDS
T04676
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pxl
Paenibacillus xylanexedens
Pathway
pxl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BS614_10455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxl03400
]
BS614_10455
DNA repair and recombination proteins [BR:
pxl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BS614_10455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
APO44384
LinkDB
All DBs
Position
complement(2397662..2398576)
Genome browser
AA seq
304 aa
AA seq
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MHTVWKGAISFGLVHVPVKMFSATEDKDISMRYIHKVCGSPLAYVRQCPSCEVDVKWEEI
TKGYEYEKGKFVLFEKDELEALNDSTSKTITILDFVDLTEIDPIYFQKTYYLSPDQAGGN
AYQLLMNAMRDTGKIGIAKISIRSKSSLAAIRVLEDCLSMETIFYPDEIRPVSQVPNLPE
VQNVNEKELTMAKLLIDQLSTPFEPGKYTDDYRSKLLDLIQHKVAGEEIKIAPAKPEANV
MDLMAALQASIEAVKPIPADPGTTTAKPKKRAPRKTPAQAVAGGESDTPATPAKRKKATP
KPKV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcataccgtctggaaaggtgcaatcagttttggccttgtgcatgtccctgtcaaaatg
ttctcggctaccgaagacaaagacatctccatgcgctatatccataaagtctgcggtagc
ccgctcgcttatgttcgtcaatgtccatcctgtgaagtggatgtgaagtgggaagagatc
accaagggctatgaatatgaaaaaggaaagtttgtacttttcgagaaagatgaattagaa
gcgttgaatgattccaccagcaaaaccattaccatactggattttgtcgacttgactgag
attgatccgatctattttcaaaaaacatattacctatcgcccgatcaggctgggggaaat
gcctaccagctgttgatgaatgcgatgcgggataccggcaaaattggcatcgccaaaatc
tctattcgctcgaagagcagcctggctgccatacgtgtactggaagattgcctctctatg
gagacgattttctatccggatgagattcgtcctgtctcccaggtgcccaacttgccggaa
gtgcagaacgtgaatgaaaaggaactcacgatggcaaagttgctgattgatcaattgtcc
acaccttttgaacccggtaaatacaccgatgactatcgcagcaaactgctggatcttatt
cagcacaaagtggcgggcgaagaaatcaagattgctccagccaaacctgaagccaatgtg
atggatttgatggcagccttgcaggcaagtatcgaggcggtgaagcctattccggctgac
cctgggacaacaacggccaaacctaagaaacgcgcaccgcgaaaaacgcctgctcaagca
gttgccggaggagaatccgatacacctgctacaccagccaaaagaaaaaaggcgacacct
aaaccaaaagtttga
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