Paenibacillus xylanexedens: BS614_11055
Help
Entry
BS614_11055 CDS
T04676
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pxl
Paenibacillus xylanexedens
Pathway
pxl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BS614_11055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxl03400
]
BS614_11055
Enzymes [BR:
pxl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BS614_11055
DNA repair and recombination proteins [BR:
pxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BS614_11055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
APO44484
LinkDB
All DBs
Position
2520009..2521115
Genome browser
AA seq
368 aa
AA seq
DB search
MLKIGSHVSFSDKGLLSATKEASSYGSSSFMIYTGAPQNTRRKPIESMYIEEGKVAMQEG
GMEDIVVHAPYIVNLGSYKDNTFRLAVDFLQEEIRRTHAIGVKNIVLHPGAFTDKDAHYG
IGRIAEGLNEVLEGVKDTDVNIALETMAGKGTEMGRSFEEIAQIIEKVTYNERLTVCMDT
CHIHDAGYDIVNDIDGVLEQFDRTVGLDRIAVMHINDSKNAVGAHKDRHTPIGSGWIGFE
AINRIVNHEKLQGRPFILETPWIGKESKTQRPMYEVEIALLRGDVAGRFGQEFLTEVEQL
QHFFKGKEIESRSYILDVWTLLKNDAKAKKADPREPLERLYDMVAEAALFPHLNEEQLNH
RLIAWLAG
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaatcggctcccacgtgtccttttcggacaagggattattgagtgcaacgaag
gaagcgtcctcgtacggttccagttcgtttatgatatatacgggtgcaccacagaataca
cgtcgcaagccaattgagtccatgtatattgaagaaggcaaagttgccatgcaagagggt
ggaatggaagatatcgttgtccatgcaccgtacattgttaatcttggctcatacaaagat
aatacgtttagactggctgtagatttccttcaggaagagattcgtcggacacatgctatt
ggtgtgaaaaacatcgtattacatcccggcgcatttacagacaaagatgcccactatggg
atcggacggatcgcagaaggattgaatgaagtgctggagggtgtgaaagacacggatgtg
aacatcgctctggagaccatggctggcaaaggtacggagatgggtcgcagtttcgaagaa
atcgcccagatcattgagaaagtaacgtataacgagcgcctgactgtgtgtatggataca
tgccacattcatgatgccggatacgatattgttaacgatattgacggtgtactggaacaa
ttcgatcgcacggtaggacttgaccgcattgccgtaatgcatattaatgatagtaagaat
gctgtgggtgcgcacaaggaccgtcatacaccaattggctctggctggatcgggtttgag
gcgattaaccgcattgtcaaccatgagaagcttcaaggacgtccatttattttggagaca
ccttggattggtaaagagtccaagacacagcgtccaatgtatgaggttgagattgcgctg
cttcgtggggatgttgccggtcgattcggccaggaattcctgactgaagtagaacagttg
caacactttttcaaaggtaaagagattgagtctcgttcgtatattctggatgtgtggacg
ttgctcaaaaatgatgccaaagccaaaaaggcagatccgcgcgaaccgctggaacgcctc
tatgacatggtggctgaagctgcactattcccgcatttgaatgaagaacaactgaatcat
cgcttgattgcatggcttgcgggttaa
DBGET
integrated database retrieval system
