KEGG   Paenibacillus xylanexedens: BS614_15385
Entry
BS614_15385       CDS       T04676                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
pxl  Paenibacillus xylanexedens
Pathway
pxl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pxl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BS614_15385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pxl03019]
    BS614_15385
Messenger RNA biogenesis [BR:pxl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BS614_15385
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH KH_2
Other DBs
NCBI-ProteinID: APO45260
UniProt: A0A1L5LPE0
LinkDB
Position
3437637..3439178
AA seq 513 aa
MEIAITIALVVAALIIGFGVGYFIRKSLAEAKISSAEQAAVQIVENAKKEAEALKKETVL
EAKDEIHRIRAEAEKDTRERRNEIQRQERRLLQKEESLDKKLESLERKEEQVANKEKRID
ETQQQIEMIYKNQVTELERISNLTMEDARSIILSNVEQEVRHETAQMIKDIEQQAKEEAD
KKSREIITLAIQRCAADHVAETTVSVVTLPNEEMKGRIIGREGRNIRALETLTGIDLIID
DTPEAVILSGFDPIRREIARTALEKLVADGRIHPARIEEMVEKSRKEVDERIREYGEQAT
FEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAYLAGLMAGELGEDVTLARRAGLL
HDIGKALDHEVEGSHVEIGVELAKKYKEHPVVINSIASHHGDCEATSVIAMLVGAADALS
AARPGARRETLETYIKRLEKLEEISESFEGVEKSYAIQAGREVRVMVQPEKIDDAEAFRL
ARDITKMIENELDYPGHIKVTVIRETRAVEYAK
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggaaattgcaatcacgatcgctctcgttgtggccgcgctaatcattgggttcggagta
gggtattttattcgcaaatctcttgcagaggctaaaatctctagtgcggaacaagctgcc
gtacaaatcgtggagaacgcgaagaaagaggcagaagcactgaagaaagaaacggtgctg
gaagcgaaggatgaaatccatcgcattcgtgctgaagctgaaaaagacactcgtgaacgt
cggaatgaaattcaacgacaagaaagacgattgttgcaaaaagaagagtcgctggataaa
aaattggaatcactcgaacgtaaagaagagcaagtggctaacaaagagaaacgaattgat
gagactcagcagcagatcgaaatgatttacaaaaaccaggtgacagagttggaacgtata
tccaacctcactatggaagacgcacgcagtatcatactgtccaacgtagaacaggaagtt
cgtcatgagacggctcaaatgatcaaggacattgaacaacaagcgaaggaagaagcggac
aaaaagtcccgcgagattattacactcgccatccaacgctgtgcggctgaccacgtagcg
gaaacaacggtatctgttgttaccctgccaaatgaagaaatgaaaggccggattatcggt
cgtgaaggacgtaacatccgtgcgcttgaaacccttacagggattgacctcattatcgat
gatacgccagaagctgttattctgtcgggctttgatccgattcgccgtgaaatcgcccgt
actgccctggagaaactggtggctgatggacgtattcacccggcacggattgaagagatg
gttgagaaatcccgcaaagaagtggatgagcgcatccgtgaatacggtgagcaagctacc
tttgaagtgggcgtgcatggtctgcatccggatctgattaaaattttgggccggttgaag
ttccgtacaagttacggtcaaaacgtcttgaaacattccatggaagtcgcttatctggct
ggactgatggctggcgaactcggagaagacgtaactctggcaagacgtgcaggtctattg
catgacatcggtaaagcgctggatcacgaagtggaaggatcacacgtcgaaattggcgtg
gaactggcgaagaaatacaaagaacatccggttgtaatcaacagtatcgcgtcccatcac
ggagattgcgaagcgacttcggtcattgccatgttggttggcgcagcagatgcgctctcc
gcagcaagaccaggcgcacgccgcgaaacgctggaaacgtatatcaaacgactggagaag
ctggaagaaatctcagagtccttcgaaggtgtcgagaaatcgtacgccattcaggccgga
cgcgaagttcgcgttatggtacagcctgagaagatcgatgatgctgaagccttccgctta
gcccgtgacatcacgaagatgattgagaatgaactcgactatccgggtcacatcaaagtc
accgtcatccgggaaacccgtgcggttgaatacgcaaaatag

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