Paenibacillus xylanexedens: BS614_18340
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Entry
BS614_18340 CDS
T04676
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pxl
Paenibacillus xylanexedens
Pathway
pxl03420
Nucleotide excision repair
pxl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BS614_18340
03430 Mismatch repair
BS614_18340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxl03400
]
BS614_18340
Enzymes [BR:
pxl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BS614_18340
DNA repair and recombination proteins [BR:
pxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BS614_18340
MMR (mismatch excision repair)
Other MMR factors
BS614_18340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
SLFN-g3_helicase
AAA_16
NACHT
DEAD
nSTAND3
AAA_30
Nlig-Ia
ResIII
Motif
Other DBs
NCBI-ProteinID:
APO45788
LinkDB
All DBs
Position
4122308..4124722
Genome browser
AA seq
804 aa
AA seq
DB search
MDKTVEWKLEEERLVQVRNKLQARLDELEPKVAGMHEQVAEIRKRFWEEVTINTGSYTDF
EDAFYTINQQSRVLAERERGHKLLTQQWKNTKRLLPTPYFGRFDYKEKGMTLTEQIYIGV
SSFMDEDGLNFLIYDWRTPIASLYYDHSPGPASYDTPSGRIEGKMELKRQFQIQHGQLHS
MFDSTETIGDELLQQVLAKGADSQMKSIVATIQKEQNAIIRDDRSRMLIVQGAAGSGKTS
AALQRVAYLLYKHRQTVKADQIVLFSPNPMFTSYTSTVLPELGEENMQQTTFQEYLNYWL
DSSIRPEDAFDQIEYVLTAQNDPGYEARLEAIKYKASETFLQVLQNYAKWLGREGMRFNG
IQFRGREFITSDQIKTQFYSLDQNLTLSNRILLLQEWLLRELVSLERLEREADWVLEELN
YLDTDEYVEAFRMLHKEKPVFDVAEKYAARENGNNKAVQDEGAFNFGVREEELLRQKLVK
DMFKPLRKSVRKFQFVDVKGIYEQLFVDETAYREQTNGAIPPQHWPEICKQTKAMILQNK
LFHEDATPYLYVKEMIEGVRTNTEIRYVFVDEGQDYSAFQYEYLKKLFPRSRMTVLGDFG
QAIFMQATDLAASNSPLVHLYGEGETTLIRLVRSYRSTKEIVEFTRQMLPGGEEIRPFER
GDQKPLLTGLKDEKMRGAQILADIAALKAEGFDSIAVITKTAAESRDAYERLQSQGGEGL
QLITKDTQIFEKGIMVIPVYLAKGVEFDAVLVYDASPVAYSQEYDRKLLYTACTRAMHRL
HLYTVSDWSPFVQALPAYLYDIKS
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggataaaacagtggaatggaagttggaagaggaaagactagtgcaggtgaggaacaag
cttcaggcacgactcgacgagttagaaccgaaggttgccggaatgcatgaacaggttgcc
gaaattcgtaaacggttctgggaagaagtgacgattaataccggttcgtacacggatttt
gaagatgcattctataccattaatcagcagtcgagagtgttggcggagagggagcgcggg
cacaagctgttaacacaacaatggaaaaatacaaagagactgcttccaacgccgtatttt
ggccgtttcgactataaggaaaaaggcatgacattgactgaacagatctacatcggcgta
tcatccttcatggatgaagatggtttgaactttctaatctatgactggcgtacgccaatt
gcgagtctgtactatgatcactctcccgggccagcaagttatgacacaccttcaggacga
atcgaaggaaagatggagctcaagcgtcaattccagattcaacatgggcaacttcatagc
atgtttgattcaactgagacgattggtgacgaattgttgcagcaagtgctcgccaagggt
gcagactcacaaatgaagagtattgtagcaactatccagaaggaacaaaacgccatcatc
cgtgatgaccgaagccgaatgcttatcgttcagggggcagctggcagtggcaagacgtcg
gctgcgttacagcgagtcgcttacttactatataaacaccgccagacagttaaagcagat
cagattgtacttttctcgccgaatccgatgtttaccagttatacttccaccgtactcccg
gaacttggtgaagagaacatgcagcagaccacttttcaggaatatctgaattattggctg
gattcctccatccgaccagaggatgcctttgatcagattgaatatgtgctgacagctcag
aatgatccgggatatgaagctcgtctggaggcgatcaagtacaaagcttccgagacattc
ctgcaagtgctccaaaactacgctaagtggttaggaagagagggcatgcggttcaacggc
attcaatttcggggacgtgaattcatcacttcagatcaaatcaagacccaattttacagt
ttggatcagaatcttaccttgtccaaccgtatacttcttttgcaggaatggctgctgaga
gaacttgtttcgctggaacgtctggaacgggaagcagactgggttctggaggagttgaat
tatctggacacggatgagtatgtggaagctttccgcatgttgcacaaagaaaagcctgtg
tttgatgtggcggaaaaatatgcagcccgtgagaacggaaataacaaggcagtgcaagat
gagggtgcctttaactttggagtgcgggaagaggagttgcttcgtcagaaattggtgaaa
gacatgtttaaacctttaagaaagagtgtgcggaaatttcagttcgtggatgtgaaaggg
atatacgaacaactatttgtagatgagaccgcttatcgggaacaaacgaatggggcaatc
cccccacagcactggcctgagatttgtaaacagaccaaggcaatgatccttcagaacaag
ctgttccatgaggatgctactccgtatttatatgtaaaagagatgatcgaaggcgtccgg
acgaacacagagattcgttatgtctttgtcgatgaaggccaggattattcggcgtttcaa
tacgaatatctcaagaaactgtttcctcgttcccgcatgacggtgctgggggatttcggg
caagcgatctttatgcaggctacggatttggcagcatccaactcgccactggttcaccta
tatggagaaggcgaaactactttgatacggctcgtacgcagttatcgttcaaccaaagag
attgttgaattcacgagacagatgttaccagggggagaagagattagaccgtttgaaagg
ggagatcagaagcctcttttaacaggattgaaggacgaaaagatgcgtggtgcgcagatt
ctcgcagacatcgccgcgcttaaggcggaggggtttgattccatcgctgtgattacaaag
accgcggctgaaagccgtgacgcctatgaaaggttgcaaagtcaaggcggcgaagggttg
cagctcataacaaaggacacacagattttcgaaaaaggaatcatggttattcctgtgtat
ctcgccaaaggagttgagttcgatgctgtcctggtctatgatgcttcacccgttgcttac
agccaggaatatgatcgcaagcttctgtatacggcctgcacacgagccatgcaccgactt
catctatatacagtgagtgactggtcaccgtttgtgcaggcattacctgcgtatctatat
gacataaaatcataa
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integrated database retrieval system
