Paenibacillus xylanexedens: BS614_22840
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Entry
BS614_22840 CDS
T04676
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pxl
Paenibacillus xylanexedens
Pathway
pxl00300
Lysine biosynthesis
pxl00470
D-Amino acid metabolism
pxl01100
Metabolic pathways
pxl01110
Biosynthesis of secondary metabolites
pxl01120
Microbial metabolism in diverse environments
pxl01230
Biosynthesis of amino acids
Module
pxl_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
pxl_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pxl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BS614_22840
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BS614_22840
Enzymes [BR:
pxl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BS614_22840
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
APO46593
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All DBs
Position
complement(5235172..5236503)
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AA seq
443 aa
AA seq
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MYLHGTSKINAQGHLEIGGVDATDLKEQFGTPLYVVDEQLVRERCREYMEAFRASGLGFQ
VAYASKAFCVMAMCALAAEEGLSLDVVSDGELFTALQAGFPAERIHFHGNNKTLEEIEMA
LDAEIGCFVVDNFNELHLLQAVAADKNRKVNILLRVTPGVEAHTHEYISTGQTDSKFGFD
IGNGTAFEAIELASKQSNLVLLGVHSHIGSQIFEVEGFQMAVQRVAEFAASVYERLHVAF
KVVNLGGGFGIRYIDGDTPLEVAQYVKAITDAVKNHFAQIGYAVPEIWVEPGRSIVGEAG
TTLYTVGTSKDIPGVRKYVAVDGGMTDNPRPALYESKYEAVLANRANEAAQETVSVAGKC
CESGDMLIWDLDLPKVESGDLLAVACTGAYNYSMASNYNRIRRPAVVFVKDGQGDVVVRR
ETYQDIIQNDLVPARIGKQPVTR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtatttacatggtacaagtaaaataaatgcgcaaggacatctggagattggcggagtt
gatgcaacagatctgaaagaacaatttggaactcccctgtacgttgtggacgagcaattg
gttcgcgagcgttgcagagagtacatggaagcattccgtgcttccggactgggcttccag
gttgcttacgcaagtaaagcattctgtgtaatggcgatgtgtgcccttgcagcagaagaa
ggactttccctggatgtcgtatctgatggtgaactgtttactgcactgcaagcaggattc
ccggctgagcgcattcacttccacggtaacaacaaaacgctggaagagatcgaaatggct
cttgatgcagagatcggatgctttgttgttgataacttcaatgaattgcatctgttgcag
gctgtagcagcggacaaaaatcgtaaagtaaacattttgcttcgtgtgacgcctggtgtt
gaggcacatacgcatgaatatatttccacaggtcagacggattccaaatttggattcgat
atcggtaatggtacagcatttgaagcgattgaactggcttccaagcagtctaacctggta
ttgctcggtgtgcattcccacatcggttcccagatcttcgaagttgaaggcttccagatg
gctgttcaacgtgttgctgaatttgcagcaagtgtatatgagcgtcttcatgttgctttc
aaagtggttaaccttggtggtggattcggaatccgttatatcgatggagatacgccgctt
gaagttgcgcaatatgtgaaggctattacagatgccgttaaaaatcattttgctcaaatc
ggctatgccgtacctgagatctgggttgagccaggccgcagcattgtgggtgaagcggga
acaacgctgtatactgttggaacaagcaaagacatcccaggcgtgcgtaaatacgttgcc
gttgatggtggtatgaccgataacccacgtcctgctttgtatgaatccaagtacgaagct
gtgcttgccaaccgtgcaaatgaggctgctcaggaaacagtatccgttgcgggtaaatgc
tgcgagagtggcgatatgttgatctgggatcttgacttgccaaaagtggaaagtggcgat
ctgctcgctgtagcttgtacaggtgcatataactattccatggcgagcaactacaaccgt
attcgtcgtccggctgttgtgtttgtcaaagatggtcaaggagatgtcgtagtacgccgt
gagacgtatcaagatatcatccagaatgacctggtacctgcgcgcattggaaaacagcca
gttactcgctaa
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