Paenibacillus xylanexedens: BS614_24165
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Entry
BS614_24165 CDS
T04676
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pxl
Paenibacillus xylanexedens
Pathway
pxl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BS614_24165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxl03400
]
BS614_24165
Enzymes [BR:
pxl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BS614_24165
DNA repair and recombination proteins [BR:
pxl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BS614_24165
Prokaryotic type
BS614_24165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
APO46830
UniProt:
A0A1L5LTX9
LinkDB
All DBs
Position
complement(5521367..5522035)
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AA seq
222 aa
AA seq
DB search
MFGNDWDKVLQEETEAEYFNKIRYTLAAEYKTQTVFPPKEDLFSALKLTPYHQVKAVIIG
QDPYHGAGQAHGLSFSVRPGVRVPPSLKNIYKELHADLDLPIPNHGSLVHWAQQGVLLLN
AVLTVREGQPNSHQALGWQTFTDAVIRALNERSEPMVYMLWGSHAQKKGAFINRDKHLVL
ESTHPSPLAAHRGFLGSRPFSKANDFLTSKGIEPIDWKIPEN
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaaacgattgggacaaggtgcttcaggaagagacggaagccgaatattttaac
aagattcgttacactctcgccgccgagtacaaaacgcagacggtctttccgcccaaagaa
gacctgttctccgcactgaagctgacgccatatcatcaggttaaggctgttattattggt
caagacccttatcacggagcgggtcaggctcatggattgagcttttcggttagaccgggg
gtgcgcgtaccgccttctctgaaaaatatatataaggaacttcatgccgatctggacctg
ccaattccgaatcatggatctctggttcattgggcacagcagggagtcttgctattaaat
gctgttctgacggttcgtgaaggtcagcctaactcgcatcaggcactagggtggcagaca
tttacggatgctgtcattcgtgcgctgaatgaacgttcggagccgatggtatatatgctg
tggggcagtcatgcccagaagaaaggtgcttttattaacagggacaagcacctggtactg
gagtctacacatcccagcccgctggctgcgcatcgtggattccttggcagtcgtcccttt
tccaaagccaatgatttcttgacctccaaaggtattgaaccgattgattggaagatacct
gaaaactag
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