Paenibacillus xylanexedens: BS614_24715
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Entry
BS614_24715 CDS
T04676
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pxl
Paenibacillus xylanexedens
Pathway
pxl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BS614_24715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxl03400
]
BS614_24715
DNA repair and recombination proteins [BR:
pxl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BS614_24715
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BS614_24715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Fungal_TACC
Motif
Other DBs
NCBI-ProteinID:
APO46929
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Position
complement(5642368..5643120)
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AA seq
250 aa
AA seq
DB search
MLYRVEGIVIRSMDYGEGNKIITLCTESGGKVGVLVRGAKKPKSRHAALVQPFTYGQYVY
FRNTGLGTLNAGEIVESYHELREDLVKASYASYACELLDRVLQDEETGTFWFKQLKACLQ
ALKEEKDPVVITSLYEMKILQASGYGPQFDECISCNQERPDEQLFISPRLGGVLCRACKH
FDPPAMSVSPKALKLLRLFAQLDLQRLGNISVSESTRDEIKKLMRAFMDHQLGLNLKSRS
FLDQMEKYGI
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgctatacagggtggaagggattgtcatccgcagcatggactacggcgaagggaacaaa
atcattacgctttgcaccgaaagcggcgggaaagtaggggtactcgtccgcggtgccaaa
aagcccaagagccgacatgctgcactggtgcagccgtttacgtatggtcaatatgtatat
tttcgcaatacaggtctaggcacactgaacgctggagaaattgttgaatcctatcatgag
ttgcgtgaagatctggtcaaggcctcttatgcctcttatgcgtgtgaactattggatcgg
gtgcttcaggatgaagagacaggtacattttggttcaaacagttaaaggcgtgtttgcag
gcgttgaaggaagagaaagatccggttgttattacaagtctgtacgaaatgaaaatatta
caggcatccgggtatggtccacagttcgatgagtgcatctcctgcaatcaggagcgacca
gatgagcagttgtttataagtcccagacttggtggcgtcttgtgtcgagcatgcaaacat
tttgatcctccagcgatgtcagttagtccaaaggctctgaagttgttgcgtttgttcgca
cagttggatctgcagcgcttggggaatatatcagtgagtgagtctacccgtgatgagatc
aaaaagttgatgcgtgcttttatggatcatcagctcggtctgaatcttaaatcccgttct
ttcctcgatcagatggagaagtacgggatttga
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