Paenibacillus xylanexedens: BS614_24940
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Entry
BS614_24940 CDS
T04676
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pxl
Paenibacillus xylanexedens
Pathway
pxl03030
DNA replication
pxl03430
Mismatch repair
pxl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BS614_24940
03430 Mismatch repair
BS614_24940
03440 Homologous recombination
BS614_24940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxl03032
]
BS614_24940
03400 DNA repair and recombination proteins [BR:
pxl03400
]
BS614_24940
Enzymes [BR:
pxl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BS614_24940
DNA replication proteins [BR:
pxl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BS614_24940
DNA repair and recombination proteins [BR:
pxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BS614_24940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
APO46972
LinkDB
All DBs
Position
complement(5694045..5695061)
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AA seq
338 aa
AA seq
DB search
MDVKSATKAIRNGETAPIYVLYGTEKYQIQQFTDMLKEQVIEEEHRDFAIIPYDLSETAV
EVVIEEAETVPFLVPRKLIIVRDASLFTAGKESKIEHQVDRLLTYMENPADYSTIVFLAQ
GDKLDERKKLVKAVKKQAVVLAFAPLSGEELLNWIVKLAKQRDVSLETGAAETLISYAGT
GLQTLSAEVDKLCLFAGNGGTIKRADIESLVARSTEQNVFSLVEELANLRLEKALSLFYE
LLKQREEPIKIAALIARQFRIMIQVKELGQQSYSQQQIASQLGLHPYAVKIAGEQARKFQ
PERLRMILSHLSELDYQMKTGAVDKVLGLELFLLRLGA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaaaagtgcaacaaaggcaatacgtaatggagaaacggcaccgatctatgtg
ctgtacggaacggagaagtaccagatacagcaatttacggatatgttaaaagaacaggtt
attgaagaagaacatcgtgattttgcgattattccatatgatttgtctgaaacggctgtg
gaggtcgttattgaagaagcagagaccgtaccttttctggttccacgcaaattaattatt
gtaagggatgcgagcctgttcaccgcaggtaaagaatccaagattgaacatcaggttgat
cgtctgcttacatatatggaaaatccggcagattacagtacgattgttttcctggcccaa
ggggataagctggatgagcgtaagaaactggtgaaagctgtcaagaaacaggcagtagtt
cttgcttttgctccactcagtggagaagagttattgaattggatagtgaaacttgcgaag
cagcgggatgtttccttggagacgggagcggcggaaacgttgatcagctatgcaggaacg
ggtcttcagaccctgtctgctgaagtagataagttatgtttgtttgcgggtaatgggggg
acaatcaaacgtgctgatatcgagtcactggttgcccgtagtacagagcagaatgtattt
tcactggtggaggaacttgctaatttgcgactggagaaagcgttgtctcttttctatgag
ttgctgaagcagcgggaagaaccaattaaaattgcggctttaatcgcacgccagtttcgg
atcatgatccaggtgaaagagttgggacaacaaagttactcccagcaacagattgccagt
cagcttggtctgcatccgtatgctgttaagattgcaggtgagcaagcccgtaaatttcag
ccggaacgtctgagaatgattttgagtcacctcagcgaactggattaccagatgaaaaca
ggagcggtggataaagtgcttggtctggagctgttcttattgagacttggtgcatga
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