Paenibacillus xylanexedens: BS614_25295
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Entry
BS614_25295 CDS
T04676
Name
(GenBank) hypothetical protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
pxl
Paenibacillus xylanexedens
Pathway
pxl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pxl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BS614_25295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pxl03000
]
BS614_25295
Transcription factors [BR:
pxl03000
]
Prokaryotic type
Helix-turn-helix
Other families
BS614_25295
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
TPR_10
HTH_3
TPR_8
TPR_11
ARM_TT21_5th
TPR_16
DUF8779
Motif
Other DBs
NCBI-ProteinID:
APO47037
LinkDB
All DBs
Position
complement(5786124..5787365)
Genome browser
AA seq
413 aa
AA seq
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MIEGKIIKFYREKNKRTQGELVKGICSVTHLSKIERGMTEYSQEIMDMLCDRLCIDMARE
VARYHQMNDLLDSWQEAIIMQRTAEAIRLKDKLEEEPLKGIPDLRLSYDLLRIRFYLFMN
NINEAERLIAEVEIPDESEHSYEHYFYHHVMGIYYFLTGHYRKSIQTLTSINQSKYTNHE
YFYHLSLAYHSIYSNITSYYYAEKAIQHFRKTLNMVRIIDTETIMLVQLNSREYHDFPET
KRRYENLIRISDDCGLPDRKAKLLNNLGYEYNRRKQYDDAAHWYRQALDIIPEKQPLYLM
VLNNYIESNRLGNLIPANKLLDMSLETLHNSKLVSDASYMELELQSVILQGQEQAYYEMI
EERILPYYRELGSQYLAERYEGILFQYYMDHGKKDKALRLAKNRFESQLTSLI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagggaagattattaaattttaccgggagaagaataaacgaactcaaggcgaa
ctggtgaaaggaatctgttcagtcacacatctgagcaaaattgaacggggaatgacagag
tattcccaagaaattatggacatgctctgtgatcgactatgtattgatatggcaagggaa
gtagcgagatatcatcaaatgaacgatctgctggattcatggcaagaggccattattatg
cagagaacagctgaagctattcgtctcaaagacaagttggaagaagaaccgttaaaaggc
atacctgatttgcgtttatcctatgacttgctgcggatccgattttacttgtttatgaat
aatatcaatgaagccgagagacttatagccgaagtggagattccggatgaatcggagcat
tcatatgaacattatttttatcaccatgtgatggggatttattatttccttacaggacat
tatcgcaaatccatccagacgttaacttcaatcaatcagtccaaatatacgaatcatgag
tacttctatcatttgtctctggcatatcactcgatatattcgaatattacgtcgtactat
tacgccgagaaagctatccagcattttcggaaaacgctcaatatggtgcgaatcattgac
accgaaaccattatgctggttcagctcaattcccgcgagtatcatgattttcctgagacg
aaacgcagatatgaaaatctgattcggattagtgatgattgtgggctccctgaccgaaaa
gccaagctgttgaacaatctgggttatgaatataaccggcggaagcaatatgatgatgct
gctcactggtacaggcaagcgcttgatatcattccggagaaacaaccgttatacctgatg
gtactcaataattacatagaatcgaatagattgggtaacctcattcctgcaaacaagctg
ttggacatgtctctggaaaccttgcacaattctaaacttgtttcagacgcaagttatatg
gaattggaacttcagtctgtcattttacaagggcaggagcaagcgtattatgaaatgata
gaagagcgaattcttccttattatcgtgaacttggttcccagtatctcgctgaacgttat
gaagggatattgtttcaatactatatggatcatggtaaaaaggacaaggcgctcaggctc
gcaaaaaatcgtttcgaatcacaattgacttcacttatataa
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