Paenibacillus xylanexedens: BS614_25945
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Entry
BS614_25945 CDS
T04676
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pxl
Paenibacillus xylanexedens
Pathway
pxl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BS614_25945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxl03400
]
BS614_25945
Enzymes [BR:
pxl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BS614_25945
DNA repair and recombination proteins [BR:
pxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BS614_25945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF2709
Motif
Other DBs
NCBI-ProteinID:
APO47155
LinkDB
All DBs
Position
complement(5939407..5940162)
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AA seq
251 aa
AA seq
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MKLVSWNVNGLRACVTKGFMDYYQESQADIFCLQETKLQAGQIEMDLGEDVYQYWNYAIK
KGYSGTAVFSRIKPISVRYGMEEDSEPEGRMITLEYDEFYLVNVYTPNAKRDLTRLPYRL
EWEDRFRGYILQLEQTKPVIICGDLNVAHQEIDLKNPKPNLGNSGFTLEERGKMTDLLAS
GYVDSFRHLYPDRTDVYSWWSYMPKVRERNVGWRIDYFLVSNQLAPKVADAHIDCHVMGS
DHCPVGLTLQL
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggtgtcctggaatgtgaatggcttaagggcatgtgtgaccaaaggatttatg
gattattatcaagagagtcaggcggacattttctgccttcaggagaccaaattgcaagcc
ggacagattgagatggacctgggggaagatgtttatcaatattggaattatgcgatcaaa
aaaggatattccggtacggctgtatttagccgaatcaagcctatatccgttcgttacggg
atggaggaggacagcgagccggaaggacggatgattacactggagtacgatgagttttat
ctggtgaacgtttatacccctaacgcaaagcgggatctgacccggttgccttaccgtctg
gaatgggaggatcgattccgggggtacattctgcaactggagcagaccaagccggttatc
atctgtggtgacctgaatgtggctcatcaggagattgatctgaagaatccgaagcccaat
ctgggcaactcgggatttacccttgaagagcgtggcaagatgaccgatttgcttgcttct
ggttatgtggacagcttccgccatctatatccggatcgtacggatgtatacagctggtgg
tcttatatgccgaaggttagagaacggaacgtgggctggcgcattgattattttctggta
tccaatcaattggcacctaaggtagcagatgcgcatatcgactgccacgtgatgggcagt
gatcattgcccggtgggtcttacgttgcaactatag
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