Paenibacillus xylanexedens: BS614_27025
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Entry
BS614_27025 CDS
T04676
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pxl
Paenibacillus xylanexedens
Pathway
pxl03420
Nucleotide excision repair
pxl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BS614_27025
03430 Mismatch repair
BS614_27025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxl03400
]
BS614_27025
Enzymes [BR:
pxl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BS614_27025
DNA repair and recombination proteins [BR:
pxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BS614_27025
MMR (mismatch excision repair)
Other MMR factors
BS614_27025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
AAA_19
Viral_helicase1
SLFN-g3_helicase
AAA_30
Mg_chelatase
ResIII
DEAD
NACHT
nSTAND3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
APO47346
LinkDB
All DBs
Position
complement(6212701..6214881)
Genome browser
AA seq
726 aa
AA seq
DB search
MSDSFQSAYQEEEYRLERTMEEVDSQLERLQNIPVYTGHDFTEQVLEAGREERRTALSKS
AQQPYFGRLDFEEQGSGARKPLYIGKIGVDREEVGEHPLVIDWRAPVASLFYSFTGGEAS
ATYEAPEGLIEGLVYLKRNVVIRQRILERVADTYNRDSDQPAVSDEFLVYRLGENKDNKL
RDIVSTIQAEQDLIIRAARNTALIIQGVAGSGKTTVALHRLAFLLYQYKEQVSAEKMVIF
APNHMFLDYISDVLPELGVGDIQQRTFPDWAMNLLGLEMPLANTSDTLNTWFEKPDARPE
LNDDVPGRYKGSIRFMELIREWLSGMEADSVPDMDFSPWDGKVLSKTEIENWFGEEYKHY
PLAKRKERVMARVHRWIEMELKKPMPEAVRKERKKKASTREKAYAKKWPQYEPLTIYKQL
FKAAKGGSVPASLSGLIPKLVMKQTAADLKQDIVREEDLPALVYIHTLVHDIEGSERFDH
IVIDEAQDFSPFHVALLDQFVKGHSFTILGDLSQGIHEYRGVHAWEEMSSLFPEEQNAYF
ALTRSYRSTMEIIDYANTILERGVKSGITAIPVFRSGDPVRTLAYGGEGRTASLEQALKV
LTVKDYRTVSILTRTLHEAEELHRELQDAGWDLNLIDGGKKQYTGGHSVLPVYLSKGLEF
DAVIVADVDQKHYLPNAGDAKLLYVGCTRALHELWLFHDGVLPIYAAATHNPDGESVTIQ
GWPELG
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagctttcaaagtgcctatcaagaagaagagtacaggttagagcgaacgatg
gaggaagtggatagtcagctggaacgactgcagaacattccggtatacaccggccacgac
ttcacagaacaagtgctggaagctggacgcgaagagcgccgcaccgccttgtccaagagc
gcgcagcaaccctatttcggacgcttggatttcgaagaacagggcagtggtgcacggaaa
ccgctgtatattggcaaaattggcgtagaccgcgaagaggtgggagagcatccgctcgtc
atcgactggcgtgctcctgtcgcaagcctgttttactcatttacgggaggggaagcctcc
gctacgtatgaagccccggaagggcttattgaaggtctcgtatatctgaaacgaaacgtt
gtcattcggcagcggatattggaacgtgtggcggatacatataaccgtgacagcgaccag
ccagcggtatctgatgaattcctcgtttatcgtctgggagagaacaaggataacaaactg
cgtgatatcgtatctacgattcaagcggagcaggatctgattattcgtgcggcgagaaac
actgcattgatcattcagggtgtagctggatccgggaaaacgacggttgccctgcatcgg
cttgcctttttgctatatcagtacaaggagcaagtatctgcggagaaaatggttattttt
gcacccaaccatatgttcctggattacatctcggatgtgcttccggaacttggagtaggg
gacattcaacagcggacattcccggattgggcgatgaacctgctggggctggagatgcct
ttggcgaatacgtcggatactttgaacacctggttcgaaaaacctgatgcacgacctgaa
ttgaatgatgatgtacctggacgttacaaaggatctatccgcttcatggagcttattcga
gagtggctctcgggcatggaagcggattccgtaccggatatggacttcagtccatgggat
ggtaaggtgctcagcaagacggagatcgagaactggttcggtgaggaatacaaacattat
ccgttggccaaacgcaaagaacgggtcatggcgcgggttcaccgctggattgagatggaa
cttaagaaaccgatgccagaagctgtgcgcaaagaacgcaagaaaaaagcgtctactcgt
gagaaagcttatgccaaaaaatggcctcaatacgagccgcttacgatatacaaacagctg
ttcaaagctgcaaagggcggctctgtgccagcctcgctcagcgggcttattccaaaactg
gtcatgaaacaaaccgcagcagatctgaaacaggatatcgtccgtgaagaggatttacct
gcattagtatacattcatacactggtccatgatatcgagggttcggagcgattcgaccat
attgtgatcgatgaagcgcaggacttttccccttttcatgtggcgttattggatcagttt
gtcaaagggcattccttcaccatactgggtgacttgtcccaaggcattcatgagtaccgt
ggtgttcatgcgtgggaagagatgagttctctgtttcctgaggaacagaatgcatacttt
gcattgacccgaagttatcgttcgacgatggaaattatcgattatgccaatacgattctg
gaacgtggcgtcaagagcggaattacggcgattcctgttttccgtagtggtgatccggtt
cggacgctggcttatggaggcgaagggcggacggcgagtctggagcaggctttaaaggtg
ttaacggtcaaagactaccgaacagtctccatcctgacccgtacactgcatgaagcagag
gaacttcatcgtgaacttcaggacgcaggctgggatctaaacctgattgatggtggcaaa
aagcagtacacaggtgggcactccgttttaccggtctatctgtctaaagggttggagttt
gatgccgttattgtggcagacgtagaccagaagcattatttgccaaatgcgggtgatgca
aagctgttgtacgttggttgtacacgtgccttgcacgagttgtggttgttccatgacggt
gtactgccgatctatgcggctgcaacacataatcccgatggcgagtccgtaaccattcag
ggttggccagagcttggctag
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