Paenibacillus xylanexedens: BS614_27100
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Entry
BS614_27100 CDS
T04676
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pxl
Paenibacillus xylanexedens
Pathway
pxl03410
Base excision repair
pxl03430
Mismatch repair
pxl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BS614_27100
03430 Mismatch repair
BS614_27100
03440 Homologous recombination
BS614_27100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxl03400
]
BS614_27100
DNA repair and recombination proteins [BR:
pxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BS614_27100
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BS614_27100
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BS614_27100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
APO47361
LinkDB
All DBs
Position
complement(6233592..6236000)
Genome browser
AA seq
802 aa
AA seq
DB search
MLYSQYRWNTPNIDLEAAAGLSQALSVSPLVGRLLVSRGVHNEKEAERFLHPDLNQMHDP
YLLLGMNEAVPRIKLALEREEHILIYGDYDADGVSSTSLMIHLMRHLGASYDIYIPHRSN
EGYGLHNHALDWAHQQGVSLIITVDTGISAVEQIAYAATLGIEVIVTDHHEPPEILPEAF
TLINPKLPGCPYPFKGLAGAGVALKLAQALIGEVPGEWMEIAAIGTVADLMPLEGENRVI
VSYGIESMRGSRLPGVSALLEISGVDQSQVTSINIAFAMAPRINASGRLDHAGRAVSLLT
TENLDEAHTLAGQLDLLNRERQQVVEGILQEATAQLEQKIQLRSGSVPDVIVLAGEGWNV
GVVGIVASKLLERYYRPTLILGIDPESGVCKGSARSIEGLDIYQALTVNKHTMDHYGGHP
AAAGMTLHRDQLEELEAGLNEFAASVLTEEDFVPQRLADDECRISDVPLKVIQEIDRLQP
FGMSNPSPRFVLRSVTVKETRTMGREKRHLKLVLEQDGQQLETVAFGKGALAEFLLPGSV
IDVMGELSINEWNGMRKPQLMLQDIHVPQVQVFDLRGNAEPLNAMKHFLSSLEVHLRYKS
GSVGAIVRKETDVSEGNSLYEPCLWVYDRKVGLFPCNAAAQHYGQEQVRTLFVFDTPETP
EQLNAMLALFSGAENIILLHGSGNRRDRLQMPSRELFKRIYMQVLKWKAEPVEEQEITPV
LSRQCGCSPRMITMMLDVFEELSFITRDNGKIAFVDNPPKRELTASRHYQAIENMAEIEQ
VMLDAATPQLTQWMISRMKGVS
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
ttgctttattcgcaataccggtggaatacaccgaatatcgatttggaggcggctgcggga
ctctcgcaggcgctttccgtttcaccccttgttggacgtttgcttgtgagtcgaggagtg
cacaatgagaaggaggccgaacgttttttgcatcctgatctgaatcagatgcatgatccc
tatctgctcctcggcatgaatgaagctgtgccacgtatcaagctggcattggagcgggaa
gaacatattttaatctacggggattatgacgctgatggcgtatccagcacatcgctcatg
atccatttgatgcgtcatcttggggcttcgtacgatatatatatccctcatcgctcgaat
gaagggtatggattgcacaaccatgcgttggattgggcccatcaacaaggcgtttcattg
attattaccgtggacaccggaatcagtgctgttgaacagattgcctatgcggcaacactg
ggcatcgaagtcattgtgacagatcaccacgagccacctgaaattttgcccgaagccttt
acacttattaatccaaaacttccgggatgcccttatccttttaaaggtttggcaggagcg
ggagtagccttgaagctcgctcaggcattaatcggggaagtgcccggtgaatggatggag
attgccgccatcggcaccgttgctgatctgatgcctttggaaggggagaaccgggttatc
gtcagttatggaatagaatcgatgcgtggttcacgtcttcccggtgtaagtgcattgctg
gaaatcagtggtgtggatcagagtcaggtgacttcgattaatattgcctttgccatggca
cctcgtattaatgccagtggacgtttggatcatgccgggagagcggtatcgcttctcacc
accgagaatctggatgaagctcatacgcttgcgggccagcttgatctattgaatcgggag
cgacagcaagtcgtagagggcatattacaagaagcaacggcacagttggaacaaaagata
cagcttcgttcaggatccgttccagatgtaatcgtattggctggtgagggctggaacgtt
ggagtggttggtattgtggcttccaaattgctggaacgttattaccgacctacacttatc
cttgggatcgatccagagagcggtgtctgcaagggctctgctcgctccattgagggcttg
gatatctatcaggcactcacagtcaataaacacactatggaccattacgggggacaccct
gcagcagcaggtatgaccttgcatcgggatcagctggaagaacttgaggctggtttgaat
gagtttgctgcatccgtattaactgaagaggactttgtacctcaacgtcttgcggatgat
gaatgcagaatcagtgatgttccgctgaaagtgatccaggagatcgacagattgcagcct
tttgggatgagcaatccttcgccacggtttgtattgagaagtgtgactgtgaaggaaacc
agaacaatgggacgagagaaacgccatctgaaactggttctggaacaggatggtcagcaa
ctggaaaccgtcgcttttggcaagggagcgttggcagagtttcttctcccaggttccgtt
attgatgtgatgggagaactgtccatcaatgaatggaatgggatgagaaaacctcaattg
atgcttcaggacattcatgttcctcaggtccaagtgtttgatttgcgcggtaatgccgag
ccattaaatgcgatgaaacatttcttgagctcacttgaggtgcatctgcgatataaatct
ggttctgttggtgctattgttcggaaagaaacagatgtttccgagggaaattcattgtat
gaaccttgcctttgggtatatgatagaaaggtcgggttatttccgtgtaatgctgctgca
cagcattatggacaggaacaagtccggacgttatttgtgtttgatacgccggaaaccccg
gaacaacttaatgccatgctggctttgttcagtggagctgagaatatcatccttctgcac
ggatcaggcaaccgccgagatcgccttcaaatgccttccagagaactctttaagcgtatt
tatatgcaggtgttgaaatggaaagctgaacccgtggaggaacaagagattactcctgtg
ctcagtcgtcagtgtggttgttcgccgcgcatgattacgatgatgttggatgtattcgaa
gagttatccttcattacccgtgataacggcaaaattgcgtttgtggataacccgcctaag
cgtgaactaaccgcttcacgtcactatcaggcgatcgaaaatatggccgagatagaacag
gtgatgctggatgcagccacaccgcaactgacacaatggatgatatcccggatgaagggc
gtatcttag
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integrated database retrieval system
