KEGG   Paenibacillus xylanexedens: BS614_29150
Entry
BS614_29150       CDS       T04676                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K03090  RNA polymerase sigma-B factor
Organism
pxl  Paenibacillus xylanexedens
Brite
KEGG Orthology (KO) [BR:pxl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pxl03021]
    BS614_29150
Transcription machinery [BR:pxl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BS614_29150
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_23 HTH_50 Sigma70_ECF GerE HTH_38 HTH_28 KORA TnsD HTH_Tnp_ISL3 Cyclophil_like2 HTH_24 HTH_10 HTH_29 DUF1492 MarR MarR_2 DUF7876 Phage_antitermQ HTH_31 HTH_3
Other DBs
NCBI-ProteinID: APO47688
LinkDB
Position
complement(6666365..6667138)
AA seq 257 aa
MNEKVTPPESMSEAIGLIWEYQQTQDNEIATVLIRKYEPMVKMAAGKIARNRPDLYEDLY
QTGQMALIRLLKQYDINLGIPFEPYAMKSMIGHMKNYLRDKSWYIQVPRRIKEKGALVQH
AIDELTVKLERSPGVNEIAEYLDLTAEETIEVLAGRECYHYVSLDSPLSQDDSAATLGEL
ISADVNDYDSVEKRMDLQQALGQLKEQEQQVLILAFQDGQSQRAIAQKLGVSQMSVSRIQ
KRATEKLKQIMSNASML
NT seq 774 nt   +upstreamnt  +downstreamnt
atgaatgaaaaagtgactcccccagagtccatgtctgaagctataggtttgatctgggaa
taccagcagacccaagataatgaaattgcaacagttctcatccgtaaatatgaaccaatg
gtcaagatggcagcaggtaaaatcgctcggaatcgccccgatctatacgaagacttgtat
cagaccgggcagatggctttgattcgtttgctcaagcaatacgatatcaacctaggtatt
ccgtttgaaccttatgccatgaagagcatgatcggtcatatgaagaactacttgcgtgac
aaatcctggtatattcaggtaccccggaggattaaggaaaagggagccctcgtgcaacat
gccattgatgagttaaccgtgaagctggagcgctcacctggtgtgaacgaaattgctgaa
taccttgatctgactgcagaagagacgattgaagttctggctggtcgggaatgttaccac
tatgtatcactggattcccctttatctcaggatgacagtgcagcaacattgggagaactg
atcagtgcagatgttaatgactatgattcggtcgaaaaacggatggacttgcaacaggca
ttgggacaattgaaggaacaagaacagcaggtacttattctagcattccaggatggccaa
tctcagcgggcaattgcccagaagcttggtgtttcacagatgagtgtatctcggattcag
aagcgagctacagagaaattgaaacagatcatgtctaatgcttcaatgttatga

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