Paenibacillus xylanexedens: BS614_30130
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Entry
BS614_30130 CDS
T04676
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pxl
Paenibacillus xylanexedens
Brite
KEGG Orthology (KO) [BR:
pxl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pxl03016
]
BS614_30130
Enzymes [BR:
pxl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BS614_30130
Transfer RNA biogenesis [BR:
pxl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BS614_30130
Prokaryotic type
BS614_30130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
APO47847
LinkDB
All DBs
Position
complement(6916845..6917618)
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AA seq
257 aa
AA seq
DB search
MRNLCMTLTYDGTAYFGFQVQPGGNTIQDHLEDAIRALTGEKVKITGSGRTDAGVHARRQ
IFNFPTESQIPIERWCIALNSRLPSDIVVIDAIEVSADFHSRYAAKKKTYRYTVNANQFP
DVFNRRLQYHHHAKLDIMAMQEGLRHFIGTYDFTSFASRKSQKENHVRSVYEAWMEVDRS
MCRDHPRDQGVIHIYLSGNGFLQHMVRIIVGTLLEIGEGKRKASDVPNMIAACNRSAAGP
TAVSCGLMLWDLEYKKD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacttatgtatgacgttaacttatgatggcactgcctatttcggcttccaagta
cagccgggtgggaatactattcaggatcatcttgaagatgcgattcgtgctttaaccggt
gagaaggttaaaattacaggttcaggccgaacagatgcaggtgttcacgcccgcagacaa
atcttcaattttcctacggagtcccagatcccgattgaacgttggtgtattgcactcaac
tccagattaccctccgatattgtcgttattgatgcgattgaagtttcggctgattttcat
tctcgctatgcagcgaaaaagaaaacgtatcgttatacagtcaatgcgaatcaatttccg
gatgtattcaacagaagactgcaatatcatcatcatgcgaagcttgatattatggcaatg
caggagggcttacgacatttcatagggacgtatgattttacctcttttgcttcacgcaag
tctcagaaagagaatcatgtccgttcggtgtacgaagcatggatggaagtggaccgatca
atgtgcagagaccatccgcgcgatcagggtgtcattcacatttatttgagtggtaacggc
tttttgcagcatatggttcgtatcattgtagggacactgctggagatcggagagggcaaa
cggaaagcctctgatgtaccaaatatgattgctgcatgtaatcgatctgctgcaggacct
actgcagttagctgcggtttaatgctctgggatcttgaatacaaaaaagattaa
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