Paenibacillus xylanexedens: BS614_30545
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Entry
BS614_30545 CDS
T04676
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
pxl
Paenibacillus xylanexedens
Pathway
pxl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BS614_30545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxl03400
]
BS614_30545
DNA repair and recombination proteins [BR:
pxl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BS614_30545
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BS614_30545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
AAA_22
nSTAND3
AAA_25
AAA_33
DnaJ_CXXCXGXG
nSTAND6
NACHT
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
APO47923
LinkDB
All DBs
Position
complement(6999389..7002247)
Genome browser
AA seq
952 aa
AA seq
DB search
MASDNIVIKGARAHNLKNIDITIPRDRFVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMEKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGHP
HCPDHGVEISSQTVEQMVDRIIQYPERTRLQILAPIISGRKGEHKSVFADVSKQGFVRVR
VNGELRDLSEDIQLEKNKKHTIEVVVDRIVVKDDVQARLADSIETALNLSGGQLLVDIMG
EEELRFSSNFACPVCGFSIEELAPRMFSFNSPFGACPDCDGLGVKMIVDPDLLVPDRTKT
IEDGAFDAWTGGTSTYYPQFLKSVCEHFNIPQNVPVEDLPAEQMNKLLQGTGTEKIRFRY
ENDFGQRKEALVTFEGIVNNLERRYRDTASEGIREFIEGYMSAKPCGTCKGQRLKRESLA
VTINDHNMAYVTSLSIGEAGRFFDTLELSEKEQTIAKLILKEINSRLGFLVNVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNDRLISTLAHMRDIGNT
LIVVEHDEDTMMAADYIIDIGPGAGIHGGTIMSQGTPEEIMNDENSLTGQYLSGRKFIPI
RAERRSVGDRWLEVRGAKENNLKNLNVKIPVGVFTAVTGVSGSGKSTLINEILYKTLARD
LNRARVRPGQHKEIRGLEHIDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNEAK
VRGYKKGRFSFNIKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCKGKRYNRETLEVKYKN
RNISDVLEMTVEDATQFFENIPKIHRKMQTLMDVGLGYINLGQPATTLSGGEAQRVKLAS
ELYRRSTGKTIYILDEPTTGLHVDDIDRLLNVLHRLVDSGESVLVIEHNLDVIKTADYVV
DLGPEGGSGGGTIVATGTPEDIVKVEASYTGKYLKPVLERDTERSKALQLVD
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
ttggcgagcgataacattgtcattaaaggcgcgcgagcgcataacctgaaaaatatcgac
attaccatcccgcgtgaccgctttgttgtattgaccggtctgagtggctcaggcaagtcc
tcgctggcttttgacacgatctatgccgaaggacagcggcgttatgtagaatcattgtca
gcttacgcacggcagtttctgggacagatggagaaaccggatgtggattccatcgaagga
ttatctcctgccatttcaatagatcagaaaacgacaagtcgtaacccacgttccacggta
ggaactgtgactgaaatttatgattacctgcgcctgttatttgcacgtgtgggccatcca
cattgtccggaccatggcgtggagatcagctcccaaactgtagaacaaatggttgatcgt
attatacaataccctgagcgcacccggttacaaatactggcacctattatctcgggccgt
aagggcgagcacaaaagtgtgtttgctgatgtgtcgaagcagggttttgtccgtgtacgg
gtgaacggggaattgcgtgatctgtcagaagatattcaattggagaaaaataaaaagcat
acgattgaagtggttgttgaccggatcgttgttaaagatgatgtacaggcgcgtctggcc
gactctattgaaacagcacttaatttgtccggtggacaactactggtggacattatgggc
gaagaagagctgcgctttagttccaactttgcctgcccggtgtgtggattcagtattgaa
gaacttgcaccacggatgttctcatttaacagtcctttcggggcttgcccggattgtgat
gggttaggtgtcaagatgatcgttgaccctgatctgctcgtaccggatcggactaagacc
atcgaagatggagcttttgatgcttggacaggtggcacatccacctattatccgcagttc
ctgaagtcagtatgtgagcacttcaacattccgcaaaatgtacctgtcgaagatctgcca
gctgagcagatgaacaagttgttgcagggtacaggtacggagaaaatccgtttccgctat
gagaatgattttggacaacgtaaggaagcgctggttacctttgaaggcatcgtaaataac
ctggagcgtcgttatcgtgatacagcatctgaaggtatccgtgaatttattgaaggttac
atgagtgcgaagccttgtggtacgtgtaaaggtcagcgtctgaaacgcgagagtcttgcg
gtaacgattaatgatcacaacatggcctatgtgactagtttgtccattggtgaagctggc
cgattctttgatacattggaattgtcggagaaagagcagacgattgccaagcttattctg
aaagaaatcaacagtcgtctcggcttcttggtgaatgttggtctggattatcttacactg
agtcgtgctgccggaacattgtccggtggggaagcccaacggatcagactggctacacag
attggttccagcctgatgggtgtgctgtatattctcgatgagccaagtattggcttgcat
caacgggataatgaccgtctgatctcaacgcttgcgcatatgcgcgacattggtaatacc
ttgatcgtggttgaacatgatgaggatacgatgatggctgccgactatatcattgatatt
ggtccaggtgcaggtatccacggaggtaccatcatgtcacagggtacaccggaggagatc
atgaacgatgagaactccttaaccggtcaatatctgagtggacgcaagttcattccgatt
cgtgcagaacgtagaagtgtaggagaccgttggttggaagtacgtggagccaaagaaaat
aacctgaagaatctgaatgtgaagattcctgtaggtgtatttactgcggtaacgggtgtg
tccggatcaggtaaatccacactgattaatgagatcctctacaaaacgctggcacgtgat
ctgaaccgtgctcgggttcgtccgggtcaacataaagagattcgtggtttggagcatatc
gataaagttatcgatattgaccaatcaccgatcgggcggacaccacgttccaacccggct
acgtataccggtgtctttgatgatatccgggatctgtttgctcagacgaacgaagccaag
gtacgtggatacaagaaaggccggttcagttttaatatcaaaggtggacgttgtgaagcc
tgccgtggagacggtattatcaaaatcgagatgcacttcttgccggacgtttatgtccct
tgtgaagtctgcaaaggcaaacgatacaaccgggaaacacttgaagtgaaatataaaaac
agaaatatttccgatgtgttggagatgacggttgaagatgcaacccaattcttcgagaac
attccgaagatccatcgcaaaatgcagacactgatggatgtgggtctgggctatattaac
ctaggtcaacctgcaaccacattgtctggtggtgaagcccagcgtgtgaagctcgcttcc
gagctctatcgccgtagtacggggaaaaccatctacatcctcgatgagccgacgaccggt
ttgcatgtcgatgatatcgaccgtttgctgaacgtattacaccgtctggttgattccggg
gaatcggtgttagtgatcgagcataacctggatgttatcaaaacggcagactatgttgtt
gatctgggtccagaaggtggtagcggtggaggtaccattgttgcaaccggaacacctgag
gatatcgttaaagtggaagcttcctatacaggcaagtacttgaagccggttctggagcgg
gataccgagcgcagcaaggcactgcaattggtggactaa
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