Pseudomonas xantholysinigenes: HU772_000020
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Entry
HU772_000020 CDS
T07643
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pxn
Pseudomonas xantholysinigenes
Brite
KEGG Orthology (KO) [BR:
pxn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxn03032
]
HU772_000020 (gyrB)
03400 DNA repair and recombination proteins [BR:
pxn03400
]
HU772_000020 (gyrB)
Enzymes [BR:
pxn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HU772_000020 (gyrB)
DNA replication proteins [BR:
pxn03032
]
Prokaryotic type
DNA Topoisomerases
HU772_000020 (gyrB)
DNA repair and recombination proteins [BR:
pxn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HU772_000020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
TcaA_2nd
Motif
Other DBs
NCBI-ProteinID:
QXI38519
UniProt:
A0A9E6PWP3
LinkDB
All DBs
Position
3798..6218
Genome browser
AA seq
806 aa
AA seq
DB search
MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD
ITVIIHPDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGDSETTGTHIHFKPSAETFKN
IHFSWDILAKRIRELSFLNSGVGILLKDERSGKEEFFRYEGGLRAFVEYLNTNKTPVNSQ
VFHFNVQRDDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYIE
QEGLAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYFA
DFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALS
ELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGI
GREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKVK
KGKQEQYIKDDEAMEEYMTQSALEDASLHLDESAPAVSGVQLEALVNEFRAVMKTLKRLS
RLYPEELTEHFIYLPEVTLEQLANHATMQDWLSKFQERLNNSQKSGLSYVTSLREDKERN
IWLPEVEITSHGLASYVTFNREFFGSNDYRSVVNLGAKLGTLLGEGAYVQRGERRKAVTE
FKEGLDWLMNESTKRHTIQRYKGLGEMNPDQLWETTMDPTVRRMLKVTIEDAIAADQLFN
TLMGDAVEPRRDFIESNALSVSNLDF
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaatcaaacgtacgactcctccagcatcaaggtgctgaaagggctggatgcc
gtacgcaaacgtcccggcatgtacattggcgacaccgatgacggcagcggcctgcaccac
atggtgttcgaggtggtcgacaactcgatcgacgaagccctggccgggcactgcgatgac
atcaccgtcatcattcacccggacgaatccatcagcgtccgtgataacggccgtggtatt
ccggtcgacgtgcataaagaagaaggcgtttccgcagccgaggtcatcatgaccgtgctg
cacgccggcggtaagttcgacgacaactcctacaaggtatccggcggtctgcacggtgta
ggtgtgtcggtggtgaacgccctgtccgagaaactggtgctcaccgttcgccgtagcggc
aagatctgggaacagacttacgtccacggtgttccacaagcgcctatggctgtggtcggt
gatagcgaaaccaccggcacccacatccacttcaagccatcggcggaaaccttcaagaac
atccacttcagctgggacatcctcgccaagcgcattcgcgagctgtctttcctgaactct
ggtgttggcatcctgctgaaggacgagcgctccggcaaggaagagttcttccgttacgaa
ggtggcctgcgcgcattcgttgaatacctcaacaccaacaagaccccggtcaactcccag
gtcttccacttcaacgtccagcgtgacgatggcgtgggtgtcgaagtcgccctgcagtgg
aacgacagcttcaacgaaaacctgctgtgcttcaccaacaacattccccagcgcgacggt
ggcacccacctggtcggcttccgctcctcgctgacccgtagcttgaacagctacatcgag
caggaaggtctggccaagaagaacaaggtcgccaccaccggtgatgacgcccgtgagggc
ctgaccgcgatcatctcggtcaaggtaccggatccgaagttcagctcgcagaccaaggac
aagctggtttcctcggaggtgaagaccgccgtggaacaggagatgaacaagtacttcgcc
gacttcctgttggagaaccccaacgaagccaaggccgtggtcggcaagatgatcgacgcc
gcccgtgctcgcgaagcagcgcgcaaggcccgtgagatgacccgccgtaaaggcgcgctg
gatatcgccggcctgccgggcaaactggccgactgccaggagaaggaccctgccctttcc
gaactgtacctggtggagggtgactccgcgggtggttcggccaagcaaggccgcaaccgt
cgcacccaggcgatcctgccgctgaagggcaagatcctcaacgtcgagaaggcacgcttc
gacaagatgatctcgtcccaggaggtcggcacgctgatcaccgccctgggctgtggcatc
ggccgcgaagagtacaacatcgacaagctgcgttatcacaacatcatcatcatgaccgat
gctgacgtcgacggttcgcacatccgtaccctgctgctgaccttcttcttccgtcagttg
ccagagctggtcgagcgtggctacatctatatcgcccagccaccgctgtacaaggtgaag
aaaggcaagcaggagcagtacatcaaggacgacgaggccatggaagagtacatgacccag
tcggccctggaagacgccagcctgcacctggacgagtcggcaccggcggtttccggtgtg
cagctcgaagcgctggtcaacgaattccgcgccgtgatgaagacgctcaagcgtctgtcg
cgcctgtacccggaagagctgaccgagcacttcatctacctgccggaagtcaccctggag
caactggccaaccatgccaccatgcaggattggttgagcaagttccaggagcgcctgaac
aatagccagaagtccggtctcagctacgtgaccagcctgcgcgaagacaaggagcgcaac
atctggctgccggaagtggaaatcacttcccacggcctggccagctacgtcaccttcaac
cgcgagttcttcggcagcaacgactaccgctcggtggtcaacctgggcgccaagctcggc
accttgctcggcgaaggtgcctacgttcagcgtggcgagcgtcgcaaggcggtcaccgag
ttcaaggaaggcctggactggctgatgaacgagagcaccaagcgtcacactatccagcga
tacaaagggttgggtgagatgaacccggaccagttgtgggaaaccaccatggacccgacc
gtgcgccgtatgctcaaggtgaccatcgaggacgcgatcgccgccgaccagctgttcaac
accctgatgggcgatgcggtcgagccacgtcgtgacttcatcgaaagtaacgcgctgtcg
gtgtccaacctggacttctga
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