Pseudomonas xantholysinigenes: HU772_001235
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Entry
HU772_001235 CDS
T07643
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pxn
Pseudomonas xantholysinigenes
Pathway
pxn00521
Streptomycin biosynthesis
pxn00523
Polyketide sugar unit biosynthesis
pxn00525
Acarbose and validamycin biosynthesis
pxn00541
Biosynthesis of various nucleotide sugars
pxn01100
Metabolic pathways
pxn01110
Biosynthesis of secondary metabolites
pxn01250
Biosynthesis of nucleotide sugars
Module
pxn_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pxn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HU772_001235 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HU772_001235 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HU772_001235 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HU772_001235 (rfbB)
00525 Acarbose and validamycin biosynthesis
HU772_001235 (rfbB)
Enzymes [BR:
pxn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HU772_001235 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
NAD_binding_10
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QXI38751
UniProt:
A0A9E6TXV4
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All DBs
Position
complement(267618..268700)
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AA seq
360 aa
AA seq
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MRILITGGAGFIGSALVRHLVSNTEHEVLNLDKLTYAGNLESLSSIADHPRYEFVQADII
DQAAVSAILARFKPHAIMHLAAESHVDRSIDGPSDFIQTNIVGTYSLLEAVRGYWSTLDE
DARKAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP
VLLTNCSNNYGPFHFPEKLIPLVILNALEGKPLPVYGDGLQVRDWLFVEDHARALFKVVT
EGEVGETYNIGGHNEQKNIDVVRGICALLEELAPQHPAGVARYADLITFVKDRPGHDQRY
AIDASKIERELGWVPEETFDTGLRKTVQWYLDNLQWCRHVQDGSYQRERLGQNSQKDSIA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattctcatcaccgggggggccggtttcatcggctcggcactggtacgtcacctg
gtcagcaacaccgagcatgaagtactcaacctcgacaagctgacctatgcgggcaacctg
gaatcgctctccagcattgccgaccatccccgctacgagttcgtccaggccgatatcatc
gaccaggctgcggtaagcgccatacttgcccgcttcaagccgcacgccatcatgcacctg
gcggcggagtcgcatgtggaccgctccatcgatggtccgtcggacttcatccagaccaac
atcgtcggcacctacagcctgctggaagccgtgcgcggctactggagcacgctggacgaa
gacgcgcgcaaggccttccgcttccaccatatttccaccgacgaggtgtacggcgacctg
cacggtgtcgacgacctgttcaccgagaccaccccgtacgcccccagttccccgtattcg
gcgagcaaggcagcctcggaccatctggtccgcgcctggcaccgcacctacggcctgccg
gtcctgctgaccaactgctcgaacaactacgggcctttccacttcccggaaaagctcatc
cccctggtgatcctcaatgccctcgaaggcaagccgctgccggtctacggcgatggcctg
caggtacgcgactggctgttcgtcgaagaccacgcccgcgccctgttcaaggtggtgacc
gagggcgaggttggcgaaacctacaacatcggtggccacaacgagcagaagaacatcgac
gtggtccgtggtatctgcgccctgctcgaagagctggccccgcagcacccggccggggtc
gcccgctacgccgacctgatcaccttcgtcaaggatcgcccaggccacgaccagcgttac
gcgatcgatgccagcaagatcgagcgcgaactgggctgggtaccagaggaaaccttcgac
accggcctgcgcaagaccgtgcagtggtacctggacaacctccaatggtgccgccatgtg
caggacggcagctatcaacgtgagcggctcggccaaaacagccagaaggattcgatcgca
tga
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