Pseudomonas xantholysinigenes: HU772_001350
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Entry
HU772_001350 CDS
T07643
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pxn
Pseudomonas xantholysinigenes
Pathway
pxn02025
Biofilm formation - Pseudomonas aeruginosa
pxn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pxn00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HU772_001350 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU772_001350 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pxn02044
]
HU772_001350 (tssM)
Secretion system [BR:
pxn02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU772_001350 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
DUF4381
Motif
Other DBs
NCBI-ProteinID:
QXI38773
UniProt:
A0A9E6PX28
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All DBs
Position
297173..300679
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AA seq
1168 aa
AA seq
DB search
MKAFFSFVIRWVIPVLGLLALSLIIWFVGPLLDVLAPVTPRVVLIVLLFAAWLAYRAWRI
VQARRQAAKVMESLAAETAPDPASLATAEELATLRQRMDEALVLLKKARLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGEGAIRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSHAQVDKAAWLGFLDLLKSQRSRRPIDGAFIAISLSDLLLGSDAERAAHATAIR
KRIQELYSQLGVRFPIYLMLTKLDLVPGFMEFFDNLSKDERAQVWGMTFALDDGQQGDGP
LAQFGSEFGLLEQRLNQRLVERLQQERDPARRDLVYGFVQQFAALRGNLTTFLDGIFKPN
AFEERALLRGVYFTSGTQEGSPIDRLIGSMAQSMGLDRAHLARQSGSGRSYFIEKLFSAV
AFAERGLVGSNPKVEQRRKWIARGALALSVALVLVVGTLWTLSYRANQQYIAEVDSRLKP
LGKSVQELSPAQRNVVEVLPLLNAVRRLADDPPGWAEGLGLYQGDMLEGESDSVYRKLLI
AIFAPRLVTRIEEQLYAGGPSDYLYEGLKAYLMLADGEHYDPEFIKAWITLDWERSLPRD
LAPDLRQALSQHLAALFDKRPPNARLDQRLIDDTRRQLQQLPVAQRVYDRVKRQKLPAGV
SDFRVSDAAGRDAALVFRFKNGKPLSEPLPGIFTVEGYRKAFLAASLAHSETLAEERWVL
GREASEAGDAKRLADDVLQLYYQDYIRNWEALLADLDFVPITSVGQAADVLRVLSGPTSP
MKKLLQAVAKETNLAQPTTLDKVQAKAEQAGVDQLRQRLGGLLGDTPLPSDNPAAREVDP
VTAHFAELAALVDTGEGQPAAIDGLLTDLNALYVQVSAMVGASGDALLGEAKNQAQAAAQ
RVALGAARQPKVVQNLVGSVLGSTHNLVMGGVRNQLNAAWTSEVVNVYRQSLSGRYPLVA
GSARDATLEDFGQFFGVGGVMDNYFRKYLQPYVNTSSTPWSWQPGAAQKLGINSNVLQTF
QRAASIRDAFFRNSNGVQPGVRFELKPVAMDATITQFLLDLDGQQVSYDHGPSRPVALQW
PNPNSIGVVRLSISPPSVTGRSGLTVEGPWAWFRLLDQSDLVAGSSPERFNLRLRVDGAS
VSYELRASSAFNPFRSRVLSGFSLPEHL
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagttttgtcattcgctgggtgatcccggtgctgggcctgctggcc
ctgagcctgatcatctggtttgtcggtccattgctggatgtgctggcgccggtcaccccg
cgcgtggtgctgatcgtcctgctgttcgcggcgtggcttgcctaccgggcatggcgcatc
gtccaggcccgccggcaggcggcgaaagtcatggaaagcctggccgccgaaacggcgccg
gaccctgccagcctcgccaccgccgaagagctggcgaccctgcgccagcgcatggacgag
gccctggtgctgctgaagaaggcgcgtctgggcggtgacgaacggcgcaacctctatgag
ttgccgtggtatgtgatcatcggcccgcccggttcgggcaagaccaccgcgctggtcaac
tccggcctgcatttcccgctggcggcgcagttgggcgagggggccatccgtggcgtgggc
ggcacgcgcaactgcgactggtggttcaccgaccaagccgtgctgctggataccgccggg
cgctacaccacccaggacagccatgcccaggtagacaaggccgcctggctgggttttctc
gacctgctcaagagccagcgctcgcgccggccgatcgacggcgcgttcatcgccatcagc
ctgtccgatctgctgctgggcagcgatgccgagcgcgccgcccatgcgacggccatccgc
aagcgcatccaggagctgtacagccagttgggcgtgcgcttcccgatctacctgatgctg
accaagctcgacctggtgccaggcttcatggagttcttcgacaacctgagcaaggatgag
cgcgcccaggtgtggggcatgaccttcgccctggatgacggccagcagggcgatggcccg
ttggcccagttcggcagcgaattcggcctgctggagcagcgcttgaaccagcgtttggtc
gaacgcctgcaacaagagcgcgacccggcgcggcgcgacctggtgtacggtttcgtccag
cagttcgccgccctgcgcggcaacctcacgactttcctcgatggcatcttcaagcccaat
gccttcgaagagcgcgcgctgctgcgcggcgtgtacttcaccagcggcacccaggaaggc
agcccgatcgaccgcctgatcggcagcatggcccagagcatgggcctggatcgcgcgcac
ctggctcgccagagcggcagcgggcgcagctacttcatcgagaaactgttcagcgcggtg
gccttcgccgagcgcggcctggtcggtagcaatcccaaggtcgagcagcggcgcaaatgg
atcgcccgtggcgccctggccctgagcgtggccctggtgctggtggtcggcaccctgtgg
accctgagctaccgcgccaaccagcagtacatcgccgaagtcgacagccgcctcaagcct
ttgggcaagagtgtgcaggagctgagcccggcgcagcgcaacgtggtcgaggtgctgccg
ctgctcaacgccgtgcgtcgcctggccgacgatccaccgggctgggccgaggggctgggc
ctgtaccagggcgacatgctcgaaggcgagtccgacagcgtctaccgcaagctgctgatc
gccatcttcgccccgcgcctggtcacccgcatcgaagagcagctgtacgccggaggcccg
tccgactacctgtacgaagggctcaaggcctacctgatgctggctgacggtgagcattac
gaccctgagttcatcaaggcctggattaccctcgactgggagcgcagcctgccccgcgac
ctcgctccggacttgcgccaggccctgtcccagcacctggcggcgctgttcgacaagcgc
ccgcccaatgcccgcctcgaccaacgcttgatcgacgacacccgtcgccagttgcagcag
ctgccggtggcccagcgcgtctacgatcgggtcaagcggcagaaactgccggccggggtc
agcgacttccgggtcagtgatgccgccggtcgtgatgcggcgctggtgttccgcttcaag
aacggcaagccactgagcgagccgttgccgggcatcttcaccgtcgagggttaccgcaag
gcgttcctggccgccagcctggcgcacagcgagaccctggccgaggagcgctgggtgctg
ggtcgcgaggccagtgaggcgggcgacgccaagcgcctggccgacgacgtgctgcagctg
tattaccaggactacatccgcaactgggaggcgctgctggccgacctggacttcgtgccc
atcaccagtgtcggccaggctgccgatgtgctgcgggtgctgtccgggccgacttcgccg
atgaagaagctgctgcaagcggtggccaaggaaaccaacctggcccagccaaccaccctc
gacaaggtccaggccaaggccgagcaggccggtgtcgaccagctgcgccagcgcctcggc
ggcctgctgggcgatacgccgctgcccagcgacaacccggcggcccgtgaggtcgacccg
gtgaccgcgcacttcgccgaactggccgccctggtggacaccggtgaaggccagccggcg
gccatcgatggcctgctgactgacctcaatgcgctgtacgtgcaagtcagcgccatggtc
ggcgccagtggcgatgcgctactgggcgaggccaagaaccaggcccaggccgcggcgcag
cgcgttgccctgggcgcggcgcgccagcccaaggtggtgcagaacctggtgggttcggtg
ctcggctccacccacaacctggtcatgggcggcgtgcgcaaccagctcaatgccgcctgg
accagcgaggtggtcaacgtctaccgccagtccctcagcgggcgctacccgctggtggcg
ggcagtgcgcgcgatgccaccctggaagacttcggccagttcttcggcgttggcggggtg
atggacaactacttccgcaagtacctgcaaccctacgtcaacacctccagcacaccctgg
agctggcagccgggcgcggcgcagaagctggggatcaacagcaacgtgctgcaaaccttc
cagcgtgcggcgagcatccgtgatgccttcttccgcaacagcaacggcgtgcagcctgga
gtgcgcttcgaactcaagccggtggcgatggacgcgaccatcacccagttcctgctcgac
ctcgacggccagcaagtcagctacgaccatggcccgagccggccggtggcgctgcagtgg
cccaaccccaacagcattggcgtggtgcgtttgtctatctcgccaccctcggtcactggc
cgttccgggctgaccgtggaagggccgtgggcctggttccgcctgctcgaccagtccgac
ctggtggctggcagctcgccggagcgcttcaacctgcgcctgcgcgtcgatggcgccagt
gtgtcctacgagctgcgtgccagcagcgccttcaacccattccgcagccgagtgctcagc
ggtttcagcctgccggagcatctgtga
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