Pseudomonas xantholysinigenes: HU772_002940
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Entry
HU772_002940 CDS
T07643
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pxn
Pseudomonas xantholysinigenes
Brite
KEGG Orthology (KO) [BR:
pxn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pxn03000
]
HU772_002940
Transcription factors [BR:
pxn03000
]
Prokaryotic type
Helix-turn-helix
Other families
HU772_002940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
PAS_4
AAA_5
PAS_9
HTH_AraC
HTH_23
PAS_8
AAA_2
HTH_22
HTH_7
HTH_50
HTH_17
HTH_30
RWP-RK
HTH_IclR
AAA
HTH_20
HVO_A0261_N
HTH_10
NACHT
MCM
IclR_C
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
QXI39066
UniProt:
A0A9E6TY61
LinkDB
All DBs
Position
636327..638291
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AA seq
654 aa
AA seq
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MQSNPFSRHAQQVLTVAHGQTSGPGSDPSIARSWLRCLEDYHLDPARAQAPVVLEHGRLL
ESRERLQQVLQIADTEMNSLHQQLSGAGHAVLLTDARGVILNCVTAPSERRIFERAGLWL
GADWSEAREGTNGIGTCLIERQALTIHQDEHFRGRHTGLTCSASPVFDPHGELLAVLDVS
SARPDMSRQSQFHTMAMVNLSAKMIESCYFLRHFEQQWLLRFHLQAESVGLFSEGLLAFD
GDGRICAANQSALNLLGSIRGGVLGKSVESFFACGHDELFSRATPQGSTAWPLHTRDGRQ
VFASLRGQARAPVWSVPVALPQASDPGICLLDPALQHDFRRAVRVFERDVPLLLRGETGC
GKEAFAQAVHQASARRHKPFVAINCASIPESLIESELFGYRGGSFTGARKEGMRGKLLQA
DGGTLLLDEIGDMPLALQTRLLRVLEERQVVPIGGEPQAVDVRIVSATHRDLLERVAQGT
FREDLYYRLNGLEVALPALRERSDKGQLLDFLLAQEAEGQVIGLEPGARQALLDFNWPGN
VRQLRNVLRTLVALCDGANIEFSDLPTVVRQGASSVGAALCRERAAERPQDPEVAGAAAQ
PFRGIRPLLHAERDALLAVLEANRWHLTRVAEHLGISRNTLYRKLRKHGINRGA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcaacccgttcagccgccatgcccagcaagtgctcacggtcgcccatgggcag
accagcgggccgggcagcgacccgtccatcgcccgctcctggctgcgctgcctggaggac
taccacctcgacccagcccgggcccaggctccggtagtgctcgagcacggccgcctgctg
gagagccgcgagcgcctgcagcaggtgctgcagatcgccgacaccgagatgaacagcctg
caccagcagctgtctggcgccggccatgcggtactgctgaccgacgcgcgcggggtgatc
ctcaactgcgtcaccgcgcccagcgagcggcgcatcttcgaacgcgccgggctatggctc
ggcgccgactggagcgaagcccgcgagggcaccaatggcatcggcacctgcctgatcgaa
cgccaggccctgaccattcatcaggatgaacactttcgcggtcggcacaccgggctgacc
tgctcggccagcccggtgttcgacccgcatggcgaactgctcgcggtgctcgacgtgtcg
tcggcgcggcccgatatgtcgcgccagagccagttccacaccatggccatggtcaacctc
tcggcgaagatgatcgagagctgctatttcctgcggcatttcgagcagcaatggctattg
cggtttcacctgcaggccgagtcggtcggcttgttcagcgaaggcctgctggccttcgat
ggcgacgggcggatttgcgcggccaaccagagcgcgttgaacctgctgggcagcatccgt
ggcggtgtactgggcaaatcggtggaaagcttcttcgcctgtggccatgacgagctgttc
agccgcgcaacaccgcaaggcagtaccgcttggccattgcatacccgcgatggccggcag
gtgttcgccagcctgcggggccaggcgcgtgcgccggtctggtcggtgccggtggcattg
ccccaggccagcgaccccggcatctgtctgctcgacccggcgctgcagcatgattttcgc
cgtgccgtgcgcgtcttcgaacgtgacgtgccgttgttgctgcgcggcgagaccggctgc
ggcaaggaggctttcgcccaggccgtgcaccaggccagtgcccgtcggcacaagccgttc
gtggcgatcaactgcgcatcgatccccgagagcctgatcgagagcgagctgttcggctac
cgcggtggcagtttcaccggggcgcgcaaggaaggcatgcgcggcaagttgttgcaggcc
gatggcggcaccttgttgctggacgaaatcggcgacatgccattggcgctgcagacccgt
ctgctgcgggtgcttgaggagcgccaggtggtgcctatcggcggcgagccgcaggcggtg
gatgtgcggatcgtcagcgccacccaccgcgacctgctggagcgggtggcgcaaggcacg
ttccgtgaagacctctattaccggctcaatggccttgaagtggcgctgccggcgctgcgc
gagcgcagtgacaaggggcagttgctggatttcttgctggcgcaggaggccgagggccag
gtcattggtcttgagcccggcgctcgccaggcgctgctggatttcaactggccaggcaac
gtgcggcagttgaggaatgtgctgcgtaccttggtggcgttgtgtgacggtgcgaatatc
gagttttccgatctgcctaccgttgtccgccaaggcgcgtcctccgtaggagcggccttg
tgccgcgaaagggccgcagagcggccccaggatcctgaagtcgccggggctgccgcgcaa
ccctttcgtggcataaggccgctcctgcacgccgaacgcgatgcgctgctcgccgtactg
gaggcaaaccgctggcacctgacccgcgtcgccgagcacctgggcatcagccgcaacacg
ctctatcgaaaactgcgcaaacacggcatcaaccgaggcgcctga
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