Pseudomonas xantholysinigenes: HU772_004455
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Entry
HU772_004455 CDS
T07643
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pxn
Pseudomonas xantholysinigenes
Pathway
pxn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HU772_004455 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxn03019
]
HU772_004455 (rhlB)
Enzymes [BR:
pxn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HU772_004455 (rhlB)
Messenger RNA biogenesis [BR:
pxn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HU772_004455 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
Motif
Other DBs
NCBI-ProteinID:
QXI39340
UniProt:
A0A9E6TYS5
LinkDB
All DBs
Position
complement(961931..963397)
Genome browser
AA seq
488 aa
AA seq
DB search
MLKALKKIFAKGDAAPQAAEPVAVPQAAPAAQPTVAQAPTHKSPRPKPAPKPKAEPQPAE
QPRAEQPAKDKPRRERKPKPQASLWKPEDFVVEPQEGKTRFHDFKLSNELMHAIHDLGFP
YCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALII
APTRELVVQIAKDAQALTKYSGLNVMSFVGGMDFDKQLKALEARHCDILVATPGRLLDFN
QRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVMNLA
KQWTTNPAIVEIEPENVASETVEQHVYAVAGSDKYKLLYNLVTQNKWERVMVFANRKDEV
RRIEEKLVRDGINAAQLSGDVPQHKRIRTLENFREGRISVLVATDVAGRGIHIDGISHVI
NFTLPEDPDDYVHRIGRTGRAGTSGVSISFAGEDDSYQLPAIEELLGRKIKCEMPPDELL
KPVPRKHH
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaaggcactcaagaaaatattcgccaagggagacgccgcgccacaggccgccgag
cccgtcgccgtgccccaggccgccccggccgcgcaaccgactgtcgcccaggccccgaca
cacaagagccccaggcccaaacccgcgcccaagccaaaggccgagccccaaccggccgag
cagccgcgcgcagaacagcccgccaaggacaagccacgccgcgagcgcaaacccaagccc
caggccagcctgtggaagcccgaggacttcgtggtcgaaccgcaggaaggcaagacccgc
ttccacgacttcaagctctccaacgagctgatgcatgccatccacgacctcggcttcccc
tactgcactccgatccaggcccaggtactcggctacaccctacgtggccaggacgccatc
ggccgggcccagaccggcaccggcaagaccgccgcgttcctgatctcgatcatttcccag
ctgcaacagacgccaccgcccaaggagcgctacatgggcgagccgcgggcgctgatcatc
gccccgacccgcgagctggtggtgcagatcgccaaggatgcccaggccctgaccaagtac
agcggcctgaacgtgatgagcttcgtcggcggcatggacttcgacaaacagctcaaggcc
ctcgaggcgcgccactgcgacatcctggtggccaccccgggccgcctgctggacttcaac
cagcgcggcgaggtgcacctggacatggtcgaggtgatggtgctcgacgaagccgaccgc
atgctcgacatgggcttcattccccaggtccggcagatcatccgccagaccccgccgaag
agcgaacgccagaccctgctgttctccgccaccttcaccgacgatgtgatgaacctggcc
aagcagtggaccaccaacccggccatcgtcgagatcgagccggagaacgtggccagcgaa
accgtcgaacagcacgtctatgcggtggccggcagcgacaagtacaagctgctgtacaac
ctggtcacgcagaacaagtgggaacgggtgatggtgttcgccaaccgcaaggacgaggtg
cggcgcatcgaggaaaaactggtgcgcgacggcatcaacgccgcccagctgtcgggcgac
gtgccgcagcacaagcgcatccgtaccctggagaatttccgcgaggggcgcatcagcgtg
ctggtggccaccgacgtggccggccgtggcatccacatcgatggcatcagccacgtgatc
aacttcaccctgccggaagacccggacgactacgtgcaccgtatcggccgtaccggccgc
gcaggcaccagcggggtgtcgatcagctttgccggtgaggacgactcctaccaactgccg
gcaatcgaggagctgctagggcgcaagatcaaatgcgagatgccgccggacgagctgttg
aagccggtgccgcgcaagcatcattga
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