Pseudomonas xantholysinigenes: HU772_005910
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Entry
HU772_005910 CDS
T07643
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pxn
Pseudomonas xantholysinigenes
Brite
KEGG Orthology (KO) [BR:
pxn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxn03021
]
HU772_005910 (rapA)
Transcription machinery [BR:
pxn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HU772_005910 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
PRKG1_interact
Motif
Other DBs
NCBI-ProteinID:
QXI39622
UniProt:
A0A9E6TYJ5
LinkDB
All DBs
Position
complement(1287267..1290113)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYSLRNAPLTRVRFSPG
DQITHFEGWKLTVREVDDVDGLLVYHGIDPQNQPRTLPETQLSNFIQFRLASDRLFAGQI
DPLSWFSLRYNTLQHTSKQMLSNLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
SNPFEDAQLALVALEWLVDDEKAQDALFAAGWDLMVVDEAHHLVWHEEQASPEYALVEQL
AQVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESDNYRPVAEAVQELLDE
GRLSPKAHATIQGFLGAEGEALLAAVTDGDSQASARLIRELLDRHGTGRVLFRNTRAAIQ
GFPERQLHPYPLANPVQYAELPSGERAELYPEVAFQAQGEVADDERWWRFDPRVDWLIDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMSILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQKHTIELHIPYLQDSP
QQRLFQWYHEGLNAFLNTCPTGNALQHQFGPRLLAQLPGGDDKGWDKLVAEARAERERLE
AELHTGRDRLLELNSGGAGEGQALVEAILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
VLKPSEKMLDASFPLGDDEGVTITYDRGQALSREDMQFLTWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLGPRVAF
ETLNDQLESVPKASANKFVQAQRDVLAKRIAAGEAKVLPTHEERVAQAQQRLTAETDEEL
ARLTALKAVNPSVRDSEIDALRQQREASLAALEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagcgacagcgaagccgagctcggt
cttgggaccatcctggcgcaggatggccgcctgttgaccgtgctctacccggccacgggc
gacacccgccagtactcgctacgcaatgcgccgctgacccgcgtgcgcttctcgccgggc
gaccagatcacccacttcgagggctggaagctgaccgtgcgcgaagtcgacgacgtcgat
ggcctgctggtctatcacggcatcgacccgcagaaccagccacgcacgctgccagagacc
cagctgtccaacttcatccagttccgcctggccagcgaccgcctgttcgccgggcagatc
gacccgttgtcgtggttctcgctgcgttacaacaccctgcagcacaccagcaagcagatg
ctctccaacctgtggggcctgggcggcgtgcgtgcgcaaccgatcgcccaccagttgcac
atcgcccgtgaagtggccgaccgtatcgccccgcgcgtattgctggccgacgaagtgggc
ctgggcaagaccatcgaggccggcctggtgatccaccgccagctgttgtccggtcgcgcc
agccgcgtgctgatcctggtgccggagaacctgcagcaccaatggctggtggaaatgcgt
cgacgcttcaacctgcaagtggcgctgttcgacgccgagcgcttcatcgaaagcgacgcc
agcaacccgttcgaggatgcccagttggcgctggtcgccctggagtggctggtggacgac
gaaaaggcccaggacgcgctgttcgccgccggctgggacctgatggtggtcgacgaagcc
caccacctggtctggcacgaggaacaggccagccccgagtacgccctggtcgagcaactg
gcccaggtcatccctggcgtgctgctgctcaccgccacccccgagcaacttggccaggac
agccacttcgcccgcctgcgcctgctcgaccccaaccgtttccatgacctggccgcgttc
cgcgccgagagcgacaactatcgcccggtggccgaagcggtacaggaactgctcgacgag
ggccgcctgtcgcccaaggcccacgccaccatccagggcttccttggcgccgaaggcgaa
gccttgctggccgcggtcaccgatggcgacagccaggccagtgcgcgcctgatccgcgaa
ctgctcgaccgccatggcaccggtcgcgtgctgttccgcaacacccgcgcggcgatccag
ggcttccccgagcgccaactgcacccctacccgctggccaaccccgtgcaatacgccgag
ctgccgtcaggcgagcgcgccgagctatacccggaagtggccttccaggcccagggcgag
gtggccgacgacgagcgctggtggcgcttcgatccacgggtcgactggctgatcgacacc
ttgaagatgctcaagcgcaccaaggtcctggtgatctgcgcccacgccgaaaccgccatg
gacctggaagacgccctgcgcgtgcgctccggcatcccggccacggtgttccacgagggc
atgagcatcctcgagcgtgaccgcgccgccgcctatttcgccgatgaagagtttggcgcc
caggtgctgatctgctccgagatcggcagcgagggccgcaacttccagttcgcccatcac
ctggtgatgttcgacctgccggcccacccggacctgctcgagcagcgcatcggccgcctc
gaccggatcggccagaagcacactatcgagctgcacatcccgtacctgcaggacagcccg
cagcagcgcctgttccagtggtaccacgaaggcctcaacgccttcctcaatacctgcccg
accggcaacgccctgcagcaccagttcggcccgcgcctgctggcgcaattgcctggtggc
gacgacaaaggctgggacaaactggtggccgaggcccgcgccgagcgcgaacgcctggag
gccgagctgcacaccggtcgcgaccgcttgctggaactcaactccggcggtgccggcgaa
ggtcaggcactggtcgaggcaatcctcgagcaggacgatcagttcgccctgccgatctac
atggaaaccctgttcgacgccttcggcatcgacagcgaggaccactcggaaaacgccctg
gtgctcaagccgagcgagaagatgctcgacgccagcttcccgctgggcgacgacgaaggc
gtgaccatcacctacgaccgcggccaggcgctgtcgcgcgaggacatgcagttcctcacc
tgggagcacccgatggtccagggcggcatggacttggtgctgtccggctcgatgggcaat
accgccgtggcgctgatcaagaacaaggcgctcaagcccggcaccgtgctgctcgaactg
ctctacgtcagcgaagtggtggctccgcgcagcctgcagctgggccgctacctgccgcca
gcggcgctgcgctgcctgctcgatgccaacggcaacgacctgggtccgcgggtggccttc
gaaaccctcaacgaccagctcgaaagcgtgcccaaggccagcgccaacaagttcgtccaa
gcccagcgcgatgtgctggccaagcgcatcgccgccggcgaggccaaggtcctgcccacc
cacgaagaacgcgtggcccaggcccagcagcgccttaccgccgaaaccgacgaagaactg
gcacgcctgaccgcactcaaggccgtcaacccgagcgtgcgggacagcgagatcgacgcc
ctgcgccagcagcgtgaagccagcctggcggccctggaaaaagccgccctgcgccttgag
gcgatccgggtgcttgtcgcgggttga
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integrated database retrieval system
