Pseudomonas xantholysinigenes: HU772_006905
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Entry
HU772_006905 CDS
T07643
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pxn
Pseudomonas xantholysinigenes
Pathway
pxn00521
Streptomycin biosynthesis
pxn00523
Polyketide sugar unit biosynthesis
pxn00525
Acarbose and validamycin biosynthesis
pxn00541
Biosynthesis of various nucleotide sugars
pxn01100
Metabolic pathways
pxn01110
Biosynthesis of secondary metabolites
pxn01250
Biosynthesis of nucleotide sugars
Module
pxn_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pxn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HU772_006905 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HU772_006905 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HU772_006905 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HU772_006905 (rfbB)
00525 Acarbose and validamycin biosynthesis
HU772_006905 (rfbB)
Enzymes [BR:
pxn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HU772_006905 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
QXI39810
UniProt:
A0A9E6PYD4
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All DBs
Position
1524194..1525264
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AA seq
356 aa
AA seq
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MTILVTGGAGFIGANFVLDWVAQSDETLINLDKLTYAGNLENLASLQGNERHVFVRGDIA
DGELLQALLSEHRPRAVVNFAAESHVDRSIHGPEDFIQTNIVGTFRLLEAVRAYWNGLEG
QAKEKFRFLHVSTDEVYGSLASEAPAFTEKHQYEPNSPYSASKAASDHLVRAYHHTYGLP
VLTTNCSNNYGPYHFPEKLIPLMIVNALAGKALPVYGDGQQIRDWLYVKDHCSAIRRVLE
AGVVGEVYNVGGWNEKPNLEIVERVCALLDELRPRADGKGYAEQVTYVTDRPGHDRRYAI
DARKLERDLGWTPAETFETGIRKTVEWYLDNQDWVESVQSGHYREWVEKNYAERSA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgactattctggtaacgggtggcgctggttttatcggtgccaactttgtgctcgactgg
gttgcccagtccgatgagaccctcatcaacctggacaagctgacctacgccggcaacctg
gaaaaccttgccagcctgcagggcaatgagcggcatgtcttcgtgcgcggcgacattgcc
gatggcgagttgctgcaggcgttgctgagcgagcatcgcccgcgggcggtcgtcaacttc
gcggccgaatcccatgtcgatcgctccatccatggcccggaagatttcatccagaccaac
attgtcgggacattccgcctgcttgaggcggtgcgtgcctactggaatgggttggaaggc
caggccaaggaaaagttccgtttcctgcatgtctcgaccgacgaagtgtatggttcgctg
gccagcgaggctccggcgttcaccgaaaagcaccagtacgagccgaacagcccgtattcg
gcgagcaaggctgccagcgatcacctggtccgggcctaccatcacacctatggcctgccg
gtgctgaccacgaactgctcgaacaactatggcccctaccacttcccggaaaagctcatc
ccgctgatgatcgtcaatgccctggcgggcaaggcgttgccggtgtatggcgacggccag
cagattcgcgactggctgtacgtgaaggaccactgcagtgcaattcgccgcgtgctcgag
gccggcgtggtcggtgaggtgtacaacgtcggcggctggaatgaaaagcccaacctggag
attgtcgagcgcgtctgcgccctgctggacgaattgcgcccgcgcgccgacggcaagggg
tatgccgagcaagtcacctatgtcaccgatcgtcctggccatgaccgccgctacgccatc
gatgcgcgcaagctcgagcgcgacctgggttggacgccggctgaaaccttcgagaccggc
atccgcaagacggtcgagtggtacctggacaaccaggactgggtcgaaagcgtgcagtcc
ggccattaccgcgagtgggtcgaaaagaactacgccgagcgcagcgcatga
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