Pseudomonas xantholysinigenes: HU772_007920
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Entry
HU772_007920 CDS
T07643
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pxn
Pseudomonas xantholysinigenes
Brite
KEGG Orthology (KO) [BR:
pxn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxn03400
]
HU772_007920
DNA repair and recombination proteins [BR:
pxn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HU772_007920
Archaeal homologous recombinant proteins
HU772_007920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QXI39992
UniProt:
A0A9E6PYU3
LinkDB
All DBs
Position
complement(1738356..1739594)
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AA seq
412 aa
AA seq
DB search
MRLFHTSDWHLGQSLHGQERDFEHACFLDWLLGQLRLRQPDALLIAGDIFDTVNPPVKAQ
ERLYDFIVQAHEQQPKLDIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVHWLDEGQLDA
QSLLIPLTNARGKVCAWCLALPFLRPAEVTGPALGDDYLKGITQVHEQLTAAAQKVRKKD
QALVAISHAHMAGGSISEDSERSLIIGNAEALPARLFDKAISYVALGHLHKPQKVNREER
IRYSGAPIPLSFAEINYPHQVLEVELDGSELVSVEARLVPRAVALQRVGPAPLGELLEQL
TQLPVIDLLEDPNRQPWLEVRVRLDEPQPDLRQQIETALQGKAVRLVRISAEYAGGGRQE
DDEQVFVELAQMTPQDLFGRAWEQAYGNPADEQALADFAELLQDVLHEEEQP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcacacctccgactggcacctgggccaaagccttcacggccaggaacgc
gatttcgaacacgcctgcttcctcgactggctgctcggccagttgcgcctgcgccagccc
gatgccctgctgatcgccggcgatatcttcgacaccgtcaatccgccggtcaaagcccag
gaacgcctctacgacttcatcgtccaggcccacgagcaacagcccaagctggatatcgtg
atgatcgccggcaaccatgactccggctcgcgcatcgagctgccggcgcctctgatgcgc
cgcctgcgcacccacgccctgggccgggtgcactggctcgacgaagggcaactggacgcc
cagagcctgctgatccccctgaccaacgcccgcggcaaagtgtgcgcctggtgcctggcc
ctgccgttcctgcggccggccgaggtcaccggcccggccctgggcgacgactacctcaag
ggcatcacccaggttcacgagcaactgaccgccgccgcgcagaaggtccgcaagaaagac
caggcgctggtcgccatcagccatgcgcacatggccggcggcagcatctcggaggattcc
gaacgcagcctgatcatcggcaatgccgaggcgctgccggcacgactgttcgacaaggcc
atcagctacgtcgccctcggccacctgcacaagccgcagaaggtcaatcgcgaggaacgc
atccgctacagcggcgcgccgatcccgctgtcgttcgccgagatcaactacccgcaccag
gtgctggaagtggaactggacggcagtgagctggtcagcgtcgaggcacgcctggtgccg
cgcgccgtggccttgcaacgggtcggcccggcgccgctgggcgaactgctcgaacaactg
acgcagttgccggtgatcgacctgctcgaagaccctaatcgccaaccctggctggaggtg
cgggtacgcctggacgaaccgcaacccgacctgcgccagcagatcgagaccgccttgcag
ggcaaagccgtgcgcctggtgcgcatcagtgccgaatatgccggcggcgggcgccaggag
gacgatgagcaagtgttcgtcgaactggcccagatgaccccgcaggacctgtttggccgg
gcctgggaacaggcctacggcaaccccgccgacgaacaggccctggccgacttcgccgag
ctgctgcaagacgtgctgcacgaagaggaacagccatga
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