Pseudomonas xantholysinigenes: HU772_008285
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Entry
HU772_008285 CDS
T07643
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pxn
Pseudomonas xantholysinigenes
Brite
KEGG Orthology (KO) [BR:
pxn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxn03032
]
HU772_008285 (topA)
03400 DNA repair and recombination proteins [BR:
pxn03400
]
HU772_008285 (topA)
Enzymes [BR:
pxn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HU772_008285 (topA)
DNA replication proteins [BR:
pxn03032
]
Prokaryotic type
DNA Topoisomerases
HU772_008285 (topA)
DNA repair and recombination proteins [BR:
pxn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HU772_008285 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QXI40061
UniProt:
A0A9E6Q162
LinkDB
All DBs
Position
1828148..1830757
Genome browser
AA seq
869 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGSQYVVKSSIGHIRDLPTSGSASASKEPAAKRGKTAAEA
PALSPKEKARRTLVARMGVDPEAGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLDR
EGEAIAWHLREAIGGDDSRYKRVVFNEITKKAIQEAFSQPGELDIDRVNAQQARRFLDRV
VGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFNPEEYWEVHADLGTAKNAKV
RFEVAREKGEAFKPLNEAQAMAALEKLKSSSYSVSKREDRPTSSKPSAPFITSTLQQAAS
NRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSTDAVEMARSYIEKEFGKQYLPAAPIV
YGSKEGAQEAHEAIRPSDVSTHPTKLSGMERDAERLYELIWRQFLACQMPPAQYLSTSVT
VVAGDYELRAKGRILKFDGYTRVLPQQSKPGEDDVLPEMAQGETLKLIQLDPSQHFTKPP
ARFTEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVTLHNRRFYSEKMGDIVTERLSESF
ANLMDYGFTAGMEENLDDVAQGERDWKNVLDEFYGDFSKKLQTAESSEHGMRANQPTLTN
IACKECGRPMMIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESLVLR
GKHRCPICATAMDAYLLDEKRKLHICGNNPDCVGYEIEEGSYRIKGYEGPSLECDKCGSE
MQLKTGRFGKFFGCTNPTCKNTRKLLKSGEAAPPKMDKVDMPELKCEKVDDTYVLRDGAS
GLFLAASQFPKNRETRAPLVLEIVPHKHEIDPKYHFLCDAPQKDPDGRPAVIRYSRKTKE
QYVQSEVDGKPTGWKAFFDGKAWKVEDKR
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcgctggtcattgtggaatccccggccaaggccaagaccatcaacaagtac
ctgggcagccagtacgtggtgaagtcgagtatcggccatatccgagaccttcccaccagc
ggttccgccagtgcgagcaaggaaccggcggccaagcgcggcaagactgcggccgaggcc
ccggcgttgtcgccgaaggagaaggctcgccgcaccttggtggcacgcatgggcgtcgac
cccgaggccggctggaaggccaagtacgagatccttcccggcaaggagaaggtgatcgag
gaattgcgccgcctggccaaggatgccgacaccatctatctcgcaaccgacttggatcgc
gagggggaagccattgcctggcacctgcgcgaagccatcggtggtgacgacagccgctac
aagcgcgtggtgttcaacgaaatcaccaagaaagccatccaggaagcgttctcccagccg
ggcgaactcgatatcgatcgggtcaatgcccagcaggcgcgtcgtttcctcgatcgcgtg
gttggctacatggtttcgccgctgctgtgggccaagatcgcccgtggcctgtcggctggc
cgtgtgcagtcggtggcggtgaagctggtggtcgagcgtgagcgcgagatccgcgcattc
aacccggaagagtactgggaagttcacgccgacctggggaccgcgaagaacgccaaggtg
cgtttcgaagtggcgcgcgagaaaggcgaagccttcaaaccgctcaacgaagcccaggcc
atggccgcgttggagaaactcaagtcctccagctacagcgtcagcaagcgtgaagaccgc
ccgaccagcagcaagccttcggcaccgttcatcacctccaccctgcagcaggccgccagc
aaccgcctgggctttggggtgaagaagaccatgatgatggcccagcgtctgtacgaggcc
ggctacatcacctatatgcgtaccgactcgaccaacctgtcgacggatgccgtcgagatg
gcgcgtagctacatcgagaaagaattcggcaagcagtacctgcccgccgcgccgatcgtc
tatggcagcaaggaaggggcgcaagaggcgcacgaggcgattcgtccctccgatgtcagc
acgcatccgaccaagctcagcggcatggagcgtgatgccgagcgcctgtacgagctgatc
tggcgtcagttcctggcctgccagatgccgccggcgcagtacctgtccaccagcgttacc
gtggtggccggcgactacgagctgcgcgccaagggccgtatcctcaagttcgacggttat
acccgtgtgctgccccagcagagcaagccgggcgaggatgacgtgctgccggaaatggcc
cagggcgagacactcaagctgatccagcttgacccaagccagcacttcaccaagccgccg
gcgcgcttcactgaagccagcctggtcaaggaaatggaaaagcgcgggatcggtcgcccg
tcgacctatgcggcgatcatctcgaccatccaggaccgcggttacgtgacgctgcacaac
cgccggttctactccgagaaaatgggtgacatcgtcaccgagcgtttgtcggagagtttt
gccaacctgatggactacggcttcaccgccggcatggaagagaacctcgacgatgtagcc
cagggcgagcgtgactggaagaacgtcctcgacgagttctatggcgacttcagcaagaag
ctgcagaccgccgagtccagcgagcatggcatgcgcgccaaccagccgaccctgaccaac
atcgcgtgcaaggagtgcggtcggccgatgatgattcgcaccgcgtccaccggcgtgttc
ctcggttgctcgggctacagcctgccaccgaaggagcgttgcaaggccaccgtcaacctg
gtgcctggcgacgagattgccgccgacgacgagggtgaatcggagtcgctggtgctgcgt
ggcaagcaccgttgcccgatctgcgccacggcgatggatgcttatctgctggacgagaaa
cgcaagctgcacatctgcggtaacaacccggactgcgttggctacgagatcgaggaaggt
agctaccgcatcaagggttatgaagggccgagcctggagtgtgacaagtgtggtagcgag
atgcagctcaagactggccgattcggcaagttctttggttgcaccaacccgacctgcaag
aacacccgcaagctgctcaagagcggcgaggcggcgccaccgaagatggacaaggtggac
atgcctgagctcaagtgcgaaaaggtcgatgacacctatgtgctgcgtgacggtgcttcg
ggcctgttcctggccgccagccagttcccgaagaaccgcgagacccgtgcgccgctggtg
ctggagatcgtgccgcacaagcacgagatcgatccgaagtatcacttcctctgcgatgcg
ccgcagaaggacccggatggtcgcccggcggtgattcgctatagccgcaagaccaaggag
cagtatgtgcagtccgaggtcgacggcaagccgaccggctggaaggcgttcttcgatggc
aaggcgtggaaggtcgaagacaagcgctga
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