Pseudomonas xantholysinigenes: HU772_010485
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Entry
HU772_010485 CDS
T07643
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pxn
Pseudomonas xantholysinigenes
Brite
KEGG Orthology (KO) [BR:
pxn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxn03032
]
HU772_010485
03400 DNA repair and recombination proteins [BR:
pxn03400
]
HU772_010485
Enzymes [BR:
pxn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HU772_010485
DNA replication proteins [BR:
pxn03032
]
Prokaryotic type
DNA Topoisomerases
HU772_010485
DNA repair and recombination proteins [BR:
pxn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HU772_010485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QXI40461
UniProt:
A0A9E6TZV9
LinkDB
All DBs
Position
complement(2297080..2298102)
Genome browser
AA seq
340 aa
AA seq
DB search
MPDCPLPAALHYVDDSLPGLSRRRWRDRFHYYDAEGQRVHDEATLARIAALVIPPAYTEV
WICADPHGHLQATGRDARGRKQYRYHAQWRALRDQHKYGRMLAFAEALPKLRKQLDEHLA
RPGLDREKVMALVISLLDSTLIRIGNRQYLRDNRSYGLTTLDSRHVQVKGATLRFQFRGK
RGVEHNVTLRDRRLAGLLKRCMELPGQALFQYLDAQGQRHGIGSSDVNQFLQQLTGAEFT
AKDYRTWAGSSLALALLKPAAWQPDSEARRQLAEAVRQVAVRLGNTPAVCRRSYIHPAVL
DHFLSGRLAELPKARQRQRLEREEVALLNFLQTLAPTDDH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcccgactgcccgttgcccgccgcgctgcactatgtcgatgacagcctacctgggctt
agccgccgccgttggcgtgaccgcttccactactacgacgccgagggccagcgcgtgcac
gacgaggcgacgctggcacgtatcgccgccctggtgatccctccggcctacaccgaggtc
tggatctgcgccgacccgcacggtcacctgcaggccactggccgcgatgcccgtggacgc
aagcagtaccgctatcacgcgcagtggcgcgcattgcgcgaccagcacaagtacgggcgc
atgctggcgttcgccgaagccctgccaaaattgcgcaagcagctggatgagcaccttgcg
cgtcccggcttggaccgtgaaaaagtcatggcactggtgatcagcctgctcgacagcacc
ctgatccgcatcggcaaccgccagtacctgcgtgacaaccgctcctatggcctgaccacc
ctcgacagccgccatgtgcaggtcaagggcgccaccctgcgcttccagttccggggcaag
cgcggcgtcgagcacaacgtcaccctgcgtgaccgccgcctggccgggttgctcaagcgc
tgcatggaactgccgggccaggcgctgttccagtacctcgacgcacaaggacagcgccac
ggcatcggttccagcgacgtcaaccagttcctgcaacagctgaccggcgccgagttcacc
gccaaggactaccgcacctgggccggcagcagcctggcactcgcgctgctcaagcctgcg
gcatggcaaccggatagcgaggcccgacgtcagctggccgaggccgtgcggcaagtggcg
gtgcgcctgggcaacaccccggccgtgtgccgtcgcagctatatccacccggccgtgctg
gaccacttcctgtcgggacgcctggccgagctgccaaaggctcgccagcgccagcggttg
gaacgcgaagaagtggccctgctgaatttcctgcagacgctggcgccaacagacgatcat
tga
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