Pseudomonas xantholysinigenes: HU772_017780
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Entry
HU772_017780 CDS
T07643
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pxn
Pseudomonas xantholysinigenes
Brite
KEGG Orthology (KO) [BR:
pxn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pxn03009
]
HU772_017780
Enzymes [BR:
pxn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HU772_017780
Ribosome biogenesis [BR:
pxn03009
]
Prokaryotic type
rRNA helicases
HU772_017780
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Helicase_C_2
ERCC3_RAD25_C
Abhydrolase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXI37182
UniProt:
A0A9E6PUG2
LinkDB
All DBs
Position
complement(4013946..4015271)
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AA seq
441 aa
AA seq
DB search
MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPLLN
RLVDLKGGRVEIRSLILLPTRELAQQTLKQVQLFSQFTYIKAGLITGGEDFKEQAAMLRK
VPDVLIGTPGRLLEHLNAGNLDLSHVQMLILDEADRMLDMGFAEDMERLCKECEQREQTL
LFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIITADHDQHKEQIVQWLLAN
ETFDKAIIFTNTRALADRIYGHLVAKDVKAFVLHGEKDQKDRKQALERFKQGSSKVLVAT
DVAARGLDIDGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLITHNDWNLMSSIER
YLKQQFERRVIKEVKGTYNGPKKVKASGKAAGSKKKKVEKKTGADKKGAAKKKPTAKPRS
NAPLASADGLAPLKKRKPAAE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgctcaaagccgtggccgagctgaaattt
gtcgagccgacgccggtgcaggcagcggccattcccctggccctgcaagggcgtgacctg
cgggtgaccgcgcagaccggcagcggcaagaccgccgccttcgtcctgccgctgctcaac
cgcctggtcgacctgaaaggtggacgggtggagatccgctcgctgatcctgctgccgacc
cgcgagctggcccagcagaccctcaagcaagtgcagctgttctcccagttcacctacatc
aaggctggcctgatcaccggcggtgaagacttcaaggaacaggccgcgatgctgcgcaag
gtccccgatgtgctgatcggcaccccgggccgcctgctggagcacctcaacgccggcaac
ctcgacctgtcccacgtgcagatgctgatcctcgacgaagccgaccgcatgctcgacatg
ggcttcgccgaagacatggagcgcctgtgcaaggagtgcgagcagcgcgagcagaccctg
ctgttctccgccactaccggcggcgcggccctgcgcgacatcatcggcaaggtgttgaag
gaccctgagcacctgatgctcaacagcgtctcgcaactggccgagggtactcgccagcag
atcatcaccgccgaccacgaccagcataaagagcagatcgtccagtggctgctggccaac
gagaccttcgacaaggcgatcatcttcaccaacacccgcgccctggccgaccgcatctac
ggccacctggtggccaaggacgtgaaggccttcgtgctgcacggcgagaaagaccagaag
gaccgcaagcaggccctcgagcgcttcaagcagggtagctccaaggtgctggtggccacc
gatgtcgccgcccgcggcctggacatcgacggcctcgacctggtgatcaacttcgacatg
ccgcgcagcggcgatgagtacgtgcaccgtgtggggcgtaccggccgtgccggtggcgaa
ggcctggcgatctcgctgatcacccacaacgactggaacctgatgtcgagcatcgagcgc
tacctcaagcagcagttcgagcgccgcgtcatcaaggaggtcaagggcacctacaatggg
ccgaagaaggtcaaggcctcgggcaaggccgccggcagcaagaagaaaaaggtcgagaag
aagaccggtgccgacaagaagggcgccgccaagaaaaagccgaccgccaagcccaggagc
aatgccccgctggccagcgccgatggcctggccccgttgaaaaagcgcaagccagccgct
gagtaa
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