Pseudomonas xantholysinigenes: HU772_021610
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Entry
HU772_021610 CDS
T07643
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pxn
Pseudomonas xantholysinigenes
Pathway
pxn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HU772_021610 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxn03400
]
HU772_021610 (recD)
Enzymes [BR:
pxn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HU772_021610 (recD)
DNA repair and recombination proteins [BR:
pxn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HU772_021610 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
AAA_11
UvrD_C_2
Helicase_RecD
AAA_22
SH3_13
Viral_helicase1
UvrD-helicase
AAA_16
SLFN-g3_helicase
TraI_hel_assoc_N
AAA_28
PhoH
T2SSE
AAA_17
nSTAND3
NACHT
NTPase_1
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QXI37895
UniProt:
A0A9E6PW84
LinkDB
All DBs
Position
complement(4834850..4836925)
Genome browser
AA seq
691 aa
AA seq
DB search
MSRNLDDLLPTPLQAEHLSALAPLRDSHDLLALLDRWVERGWLRALDRAFVGFLEERAPG
SDPLVLLAAALASHQLGHGHVCLDLRQTLAEPDFALSLPPEGDALTGPLLLPSQLLGSLD
LALWLQRIGQSTLVAAGDSLAQRPRPLVLSGERLYLRRYWTYERRIDTTLHERLARQFPV
QADLPQRLAQLFDEGAPMGEVDWQKLACALATRAGFSVITGGPGTGKTTTVVRLLALLQG
PAVEQGRPLRIRLAAPTGKAAARLTESIGQQVARLQVASEVREQIPTEVSTVHRLLGSRP
GSRHFRHHAGNPLPLDVLVVDEASMIDLEMMANLLDALPANARLVLLGDKDQLASVEAGA
VLGDLCRDAEDGCYWPQTLAWLEQMGGQSLAGVGLQAGDGLRKPLAQQIVMLRHSRRFGE
GSGIGQLARLVNRQQALEARALLAKRLDDVFCLTLGGEHDKRLDRLLLDGLNQGTEGPQG
YRSYLRTIGRLRPAPGTPADDPRWEQWASEVLRGFEAFQLLCAVRKGAWGVEGLNERVAR
VLHNAGLIDTQQPWYEGRPVLVTRNDYGLGLMNGDIGIALRLPDEQGEALLRVAFPRNDG
SGGVRFVLPSRLSDVETVFAMTVHKSQGSEFSHTALVLPDALNPVLTKELVYTGITRAKQ
CFSLVEPRAGVFEEAVGRKVRRVSGLMLEQV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaaatctcgacgatctgctgccgacaccgttgcaggccgagcacctcagcgcc
ctggcgcccctgcgcgacagccatgatctgctggcattgctcgatcgctgggtcgaacgc
ggctggctgcgtgccctcgaccgggcgttcgtcggtttcctcgaagagcgcgccccaggc
agcgaccctctggtgctgctggcggcggcgttggccagtcaccaactgggtcatgggcat
gtctgcctcgacctgcgccagaccctcgccgagccggatttcgccctgtcgctgccgccg
gaaggcgatgccctgacaggccctctgctgttgccatcacagctgctaggcagtctcgac
ctggcgttgtggttgcagcgcatcgggcagagcacgctggtggccgctggcgatagcctg
gcgcaacgtccccgccccttggtgctcagtggcgaacgtctgtacctgcgccgctactgg
acctacgagcggcgcatcgataccacgctgcacgagcgcctggcgcgccagttcccggtg
caagccgacctgccgcagcgcctggcccagttgttcgacgaaggggcgccgatgggcgag
gtggattggcaaaagctcgcctgtgccctggctacccgggcaggtttcagcgtgatcacc
ggggggccgggcaccggcaagaccaccaccgtggtgcgcctgctggcgttgttgcagggg
cccgcggtcgagcagggccggcccctgcgcatccgcctggcggcgccgaccggcaaggcc
gcggcacgcctgaccgaatccatcggccagcaggtggcgcgcttgcaagtggcgtccgag
gttcgcgagcagatccccaccgaggtcagtaccgtgcaccgcctgctgggcagccgtccc
gggtcgcggcacttccgccaccacgcgggcaatcccctgccgctggatgtgctggtggtc
gacgaggcgtcgatgatcgacctggagatgatggccaacctgctcgacgccttgccggcc
aatgcgcggctggtgctgttgggcgacaaggaccagttggcgtcggtggaggccggtgcg
gtgctcggcgatctgtgccgggatgccgaggacggttgctactggccgcaaaccctggcc
tggctggagcagatgggggggcagtcgctggccggtgtcggtttgcaagcgggcgatggc
ctgcgcaagccgctggcccagcagattgtcatgctgcgccattcccggcgcttcggtgag
ggcagcggcatcggccagctggcgcggctggtcaaccggcagcaggcgcttgaggcacgc
gcgctgctggcgaaacggctcgacgatgtgttctgcctgacgctcggtggcgagcacgac
aagcgcctcgaccgcctgctgctcgatggcctcaaccagggcacggagggcccgcaaggc
taccgcagctatctgcgtaccattggtcgcctgcgtccggcgccgggcacccccgccgac
gacccgcgctgggagcagtgggccagcgaagtgctgcgcggcttcgaagctttccagttg
ctgtgcgcggtgcgcaagggcgcctggggcgtggaggggctgaacgaacgggtggcccgg
gtgctgcacaacgccggtctgatcgacacccagcaaccctggtacgaggggcgcccggtg
ctggtgacccgcaacgactacggcctcggcctgatgaacggtgacattggcatcgccctg
cgcctgccggacgagcagggcgaggcgctgctgcgggtggccttcccgcgcaacgacggc
agtggcggcgtgcgtttcgtcctgcccagccggctcagcgacgtggaaaccgtgttcgcc
atgaccgtgcacaagtcccagggctctgagttcagccataccgcgctggtcttgcctgat
gcgctgaacccggtgctgaccaaggagctggtgtacaccggcatcacccgcgccaagcag
tgcttcagcctggtggaaccgcgcgccggggtgttcgaggaggccgtcgggcgcaaggtc
aggcgagtgtcggggttgatgctggagcaagtctga
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