Pseudomonas xantholysinigenes: HU772_024680
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Entry
HU772_024680 CDS
T07643
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pxn
Pseudomonas xantholysinigenes
Pathway
pxn03420
Nucleotide excision repair
pxn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pxn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HU772_024680 (uvrD)
03430 Mismatch repair
HU772_024680 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxn03400
]
HU772_024680 (uvrD)
Enzymes [BR:
pxn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HU772_024680 (uvrD)
DNA repair and recombination proteins [BR:
pxn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HU772_024680 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HU772_024680 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
AAA_22
Viral_helicase1
DUF5681
Motif
Other DBs
NCBI-ProteinID:
QXI38475
UniProt:
A0A9E6PVY4
LinkDB
All DBs
Position
5559680..5561863
Genome browser
AA seq
727 aa
AA seq
DB search
MHNDDLSLLLNSLNDAQRQAVAASLGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSI
LSVTFTNKAAAEMRQRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLAQNFQILDSD
DQQRLIKRVIREMGLDEQKWPARQVQWFINGQKDEGLRPRHIQASGDLFLATMRDIYVAY
EQACDRAGVIDFSELLLRALDLWRDQPDLLRHYQRRFRHILVDEFQDTNAVQYAWLRLLA
SGGDSLMAVGDDDQSIYGWRGAKIENIHQYTADFPDAELIRLEQNYRSTGGILKAANALI
ANNSGRLGKELWTDMGEGEPITLYAAYNEHDEARYVVETIESIIKQGSARNEIAILYRSN
AQSRVLEEALLRERVPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPPRG
IGEKTVEAIREHARHGQLSMWDAMCQLLAAKALKGRAASALGAFIELLENLAAKVLDMPL
HLMTQTVIEQSGLIIYHQEEKGEKGQARVENLEELVSAARNFESSDEDGDLSPLSAFLGH
ASLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERR
LAYVGITRAMRQLVMTYAETRRLYGSETYNKVSRFVREIPAGLVQEVRLSNTVSRPFGGA
KTPASSLFANASIPQTAFSLGQRVQHAVFGEGVILNFEGSGAQARVQVNFSEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatgatgacctctccctcctgctgaactccctcaacgacgcccaacgccaggcc
gtagccgcctcgctggggcgccaactggtattggccggcgccggctcgggcaagacccgg
gtactggtgcaccgtatcgcctggctgatccaggtcgaacaggcctcgccgcattcgatc
ctgtcggtgaccttcaccaacaaggccgcggcggaaatgcgccagcgtatcgagcaactg
ctgggtatcaacccggccggcatgtgggtaggcaccttccacggcctggcgcaccgcttg
ctgcgcgcgcactggcaggaagcggggttggcgcagaacttccagatcctcgacagcgac
gaccagcagcgcctgatcaagcgagtgatccgcgagatgggcctggacgagcagaagtgg
ccagcgcgccaggtgcagtggttcatcaacgggcagaaggacgaaggcctgcgcccacgg
cacatccaggccagcggcgacctgttcctggccaccatgcgcgacatctatgtggcctat
gagcaggcctgcgaccgcgccggggtcatcgacttctccgagctgctgctgcgcgccctc
gacctttggcgcgaccagccagacctgctgcgccattaccagcgccgcttccggcatatc
ctggtggatgagttccaggacaccaacgccgtgcagtacgcctggctgcgcctgctcgcc
tccggcggcgacagcctgatggcggtgggcgacgacgaccagtcgatctacggctggcgc
ggcgcgaaaatcgagaacatccaccagtacaccgccgacttccccgacgccgagctgatc
cgcctggagcagaactaccgctccaccggcggcatcctcaaggccgccaacgccttgatc
gccaacaacagcgggcgtctgggcaaggagctgtggaccgacatgggcgaaggcgagccg
atcacgctgtacgccgcctacaacgagcacgacgaagcgcgctacgtggtcgagaccatc
gagagcatcatcaagcagggtagtgcgcgcaatgaaatcgccatcctgtaccgctccaac
gcccagtcgcgggtgctggaagaagccctgctgcgcgagcgcgtgccctaccgcatctat
ggcggccagcgcttcttcgaacgcgccgagatcaagaacgccatggcctacctgcgcctg
ctcgaaggccgcggcaatgacgcggcgctggagcgggtgatcaacgtgccgccgcgcggc
atcggcgagaagaccgtcgaggcgatccgcgaacacgcccgccacggtcagctgtcgatg
tgggacgcaatgtgccagctactcgccgccaaggccctgaagggccgtgccgccagcgcc
ctgggcgcgttcatcgaactgctcgagaacctggccgccaaggtcctggacatgccgctg
cacctgatgacccagaccgtcatcgagcagtccgggctgatcatctatcaccaggaagaa
aagggcgagaaaggccaggcccgggtggagaaccttgaggaactggtcagcgccgcgcgc
aacttcgagagcagcgacgaagacggcgacctgtcgccgctgtcggccttcctcggccac
gcgtcgctggaggccggcgacacccaggccgacgagcacgaagacagcatccagctgatg
accctgcacagtgccaagggcctggaattcccctacgtattcctggtgggcatggaggaa
gggctattcccgcacaagatgagcctggaagaacccggccgcctcgaggaagaacgccgc
ctggcctatgtcggcatcacccgggccatgcgccagctggtcatgacctatgccgaaacc
cgccgcctgtatggcagcgagacctacaacaaggtgtcgcgtttcgtccgcgaaatcccg
gccgggctggtgcaggaagtacgcctgtcgaataccgtcagccgcccgttcggcggcgcc
aagacgcccgccagcagcctgttcgccaatgccagcatcccgcagaccgccttcagcctg
ggccagcgggtgcagcatgcggtgttcggcgaaggcgtgatcctcaacttcgaaggctcc
ggcgcccaggcgcgggtgcaggtgaacttctccgagggtagcaagtggctgatgcttggt
tacgccaagctggaagctatatga
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integrated database retrieval system
