Pseudoalteromonas sp. Xi13: EJ103_00020
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Entry
EJ103_00020 CDS
T10490
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pxsi Pseudoalteromonas sp. Xi13
Brite
Enzymes [BR:
pxsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EJ103_00020 (gyrB)
DNA replication proteins [BR:
pxsi03032
]
Prokaryotic type
DNA Topoisomerases
EJ103_00020 (gyrB)
DNA repair and recombination proteins [BR:
pxsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EJ103_00020 (gyrB)
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Gene cluster
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Other DBs
NCBI-ProteinID:
AZN31193
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Position
1:3631..6057
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AA seq
808 aa
AA seq
DB search
MSENYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCDDIY
VTIHLDGSVSVRDNGRGIPTSIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLTLTIRREGKLHEQTYSMGVPNAPLAVIGDADTTGTELRFWPSGETFTNLD
FHYDILAKRLRELSFLNSGVSIILSDEREENKTDHFKYDGGIQAFVEYLNRNKTPVHKGV
FHFTHEREEDGISVEVSMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRSALTRTLNNYME
KEGFNKKAKTTSNATGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQAMAEK
FSDFLLENPMDAKIVVGKIIDAARAREAARKAREMTRRKGAMDLAGLPGKLADCQEKDPS
LSELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGC
GIGRDEYDPEKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGYIYIAQPPLYK
VKKGKQERYIKDDPALVEYLTSLALNNAALYTSEDASAIEGEALEQIVQDYQNTVKVIER
LKRKYPNTVMERLIYQSELKIEDLSNEAKVIEWTKELVDDLVERDEDATIFHAGTEHDAE
RNLYFPVVNIRQHGVDKAHVLHYDFIASRDYQRIAVTGTKIANILKEGAYVQRGEKTKPV
DNFVDALEWLIAESKRGIYIQRYKGLGEMNPSQLWETTMDPSARRMLQVTIEDAVAADQL
FATLMGDQVEPRREFIETNALRVVNLDV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaattatgattcgtcgagtattaaagtacttaaaggattagacgcagtaaga
aagcgtcctggaatgtatataggggacaccgatgatggcacaggcttacaccacatggtg
tttgaggtcgttgataactctatcgatgaagccttagcaggtcattgtgatgatatttat
gtaacgattcacttagacggttcagtctctgtaagagataacggtcgtggtatcccaact
tctatccatgaagaagaaggtgtgtctgctgccgaggttatcatgacggtacttcatgcc
ggtggtaagtttgatgataactcttataaagtatctggtggcttacatggtgttggtgta
tcggtagtaaatgcattatcagaaaaactaactcttactattcgtcgtgaaggcaaattg
cacgagcaaacttacagcatgggcgtacctaacgctccattagctgttattggcgatgct
gacactacgggtactgaactgcgtttttggccaagtggcgaaacatttacaaaccttgat
tttcattacgatattttagccaagcgtttacgtgagctatcgtttttgaactctggtgta
agcatcatcttatctgatgaacgcgaagaaaataaaaccgaccactttaaatatgatggc
ggtattcaagcgtttgttgaatacttaaaccgcaataaaacacctgtacataaaggtgta
ttccattttactcacgagcgtgaagaagatggtattagcgttgaagtttcaatgcagtgg
aacgatggcttccaagaaaacatttactgttttactaataacattccacaacgtgatggt
ggtactcacttagccggctttagatctgcgctaacacgtacacttaataactacatggaa
aaagaaggctttaacaaaaaagctaaaacaaccagtaatgcaacgggcgatgatgcgcgt
gaaggcttaacagcggttgtaagtgttaaagtacctgatcctaagttctcatcacaaact
aaagacaagctagtatcaagcgaagttaaatctgcggttgagcaagcaatggctgaaaag
ttttctgatttcttattagaaaacccaatggatgccaaaattgttgttggtaaaattatt
gatgcagcacgagcacgtgaagcggcccgtaaagcccgcgaaatgactcgtcgtaaaggc
gctatggatttagctggtttacctggtaaattagctgactgccaagaaaaagacccatca
ttatctgaactatacatagtggagggtgactcagctggcggttcagccaagcagggtcgt
aatcgtaaaaaccaagcaattttgccacttaaaggtaaaatcttgaacgtagagaaagca
cgctttgataagatgctttcttcacaagaagtagcaacgctaataacagccctaggttgt
ggtattggccgtgatgaatatgacccagaaaaactacgttaccacagcatcattatcatg
accgatgcggacgtggatggttctcacattcgtacattgctactaacattcttctatcgc
caaatgccagaaattgttgagcgtggttatatttacattgcacaaccgccactttataaa
gtgaaaaaaggtaagcaagagcgttatattaaagacgatcctgcacttgtagagtaccta
acatcacttgcactaaataatgcagcgctttacacaagcgaagatgcaagtgcaattgaa
ggtgaagcgcttgagcaaatagtacaagattaccaaaacacagttaaagtcattgagcgc
ttaaaacgtaaataccctaacacggtaatggaacgtttgatttaccaaagcgagttaaaa
atagaagacttatctaacgaagctaaggtaattgagtggactaaagagcttgttgatgac
ttagttgaacgtgatgaagatgcgacaattttccacgctggaacagagcatgatgcagag
cgcaacttgtacttcccggttgtgaatattcggcagcacggtgtggataaagcacacgta
ttacactacgactttattgcatcacgtgactaccaacgcattgctgttactggcacgaag
atcgcaaacatcttaaaagaaggcgcatatgttcaacgtggtgagaaaacaaaacctgtt
gataactttgtggatgctttggaatggttgatcgcagaatctaagcgcgggatctacatt
cagcgctataaaggattaggcgaaatgaaccctagccaactgtgggaaaccacaatggat
cctagcgctcgtcgtatgttacaagtaacaattgaagatgctgtagcggcagatcaattg
tttgcaacattaatgggcgatcaagttgagcctcgtcgtgagtttatagaaaccaacgca
cttcgcgtagttaacttagacgtgtaa
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