Pseudoalteromonas sp. Xi13: EJ103_00060
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Entry
EJ103_00060 CDS
T10490
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pxsi Pseudoalteromonas sp. Xi13
Pathway
pxsi00071
Fatty acid degradation
pxsi00280
Valine, leucine and isoleucine degradation
pxsi00310
Lysine degradation
pxsi00362
Benzoate degradation
pxsi00380
Tryptophan metabolism
pxsi00410
beta-Alanine metabolism
pxsi00640
Propanoate metabolism
pxsi00650
Butanoate metabolism
pxsi00907
Pinene, camphor and geraniol degradation
pxsi00930
Caprolactam degradation
pxsi01100
Metabolic pathways
pxsi01110
Biosynthesis of secondary metabolites
pxsi01120
Microbial metabolism in diverse environments
pxsi01200
Carbon metabolism
pxsi01212
Fatty acid metabolism
Module
pxsi_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pxsi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
EJ103_00060 (fadB)
00650 Butanoate metabolism
EJ103_00060 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
EJ103_00060 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
EJ103_00060 (fadB)
00310 Lysine degradation
EJ103_00060 (fadB)
00380 Tryptophan metabolism
EJ103_00060 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
EJ103_00060 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
EJ103_00060 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
EJ103_00060 (fadB)
00930 Caprolactam degradation
EJ103_00060 (fadB)
Enzymes [BR:
pxsi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
EJ103_00060 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
EJ103_00060 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
EJ103_00060 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
EJ103_00060 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AZN31200
LinkDB
All DBs
Position
1:complement(12506..14665)
Genome browser
AA seq
719 aa
AA seq
DB search
MLYKSDSFEVSFLKENIAEFKFCVAGSVNTLSQQTLSDCAAALKELASNSDIKGMIFTSD
KDHFIIGADIFEFLPTFTKPEEELVTWIKNATDVFDAIEDLPFPTLSAINGLALGGGCEW
ALATDYRVASETAKMGLPEVKLGIMPGFGGTVRLPRIIGADNAMLWITSGKENRATDALK
VGAFDAVVSADKLLESSLATLELAIAGKLDWQAKRDVKLQPLKLNRVEQGMSFAMAEGMV
MGKTKGHYPAPVMAVRTIKAAANCTRDEAMAIENANFAKLARTNEAAAQTGIFLNDQFIK
GKARKLAKHSDVEIKQAAVLGAGIMGGGIAYQSAYKGTPIIMKDIQQDALDLGMGEASKL
LGAKVKRGHMPMEKMLATLSKIKPTLNDADLQSANIIVEAVVENPKVKQAVLADLEKNMP
EGTVLTSNTSTICIDLLAEALDKPENFCGMHFFNPVPKMPLVEIIRGAKTSDKTINAVVD
YALKLGKSPIVVNDCPGFFVNRVLFPYFAGFSKLVVEGANFAKVDKVMENVFGWPMGPAY
LLDVVGIDTAYHCTGVMADGFPERMARAEKDPVTVFANEKRFGQKNKAGFYKYETDRRGR
LKKSSDATAVELLAPITDAPKEFDKQEIIDRCMIPMINEVLLCLQEGIVASPQEADMALV
YGVGFPPFRGGAFRYLDQTGLANFVAAADKYAHLGAIYQVSEQTRKWAEEGRVFYKVEG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttatataaaagcgattcctttgaagttagcttcctaaaggaaaacatcgccgagttt
aagttttgtgttgcaggttctgtaaacacactatctcagcaaactctttcagattgtgca
gcagcattaaaagaattagcgtctaattctgatatcaaaggcatgattttcaccagtgat
aaagatcactttattattggtgcagatatcttcgaatttttaccaacatttactaaacca
gaagaagaattagtaacgtggatcaaaaacgcaaccgacgtttttgacgcaatcgaagac
ttaccattcccaactcttagcgctataaatggcttggcacttggcggcggctgtgagtgg
gcacttgctaccgattatcgcgttgcaagcgaaaccgctaaaatgggcttaccagaagtt
aaactaggtataatgcctggttttggtggcacagtgcgcttaccacgcattattggcgca
gataacgccatgctttggattacctcaggcaaagaaaaccgtgccactgatgccctaaaa
gtaggtgcatttgatgcggtagttagtgctgacaaacttttagagtcaagcctagcaaca
cttgaattagcaattgccggcaaactagattggcaagcaaaacgcgatgttaaacttcag
ccacttaaattaaaccgtgttgagcaaggcatgagctttgcgatggcagaaggtatggta
atgggtaaaaccaaaggccactatcctgctccggttatggcagttcgcactattaaagca
gcggccaactgtactcgcgatgaagcaatggcaatcgaaaatgctaactttgcaaaactt
gcgcgcactaacgaagcagctgcacaaaccggtattttcttaaatgaccagtttattaaa
ggcaaagcacgtaaacttgctaagcacagcgatgttgaaattaaacaagctgccgtatta
ggcgcaggtattatgggcggcggtattgcataccagtcagcttataaaggcacaccaatc
ataatgaaagacatccaacaggatgcgctagatttaggtatgggcgaagcgtctaaacta
ctgggtgcaaaagttaaacgcggccacatgccaatggaaaaaatgctggcaacgcttagc
aaaattaagccaacgcttaacgatgcagacctacaaagcgccaacattattgttgaagcg
gttgtagaaaaccctaaagttaagcaagcggtattagctgaccttgaaaagaacatgcca
gaaggcacggtacttacatcaaacacatcgactatttgcatagacttacttgcagaagcg
ttagataaaccagaaaatttctgtggtatgcactttttcaatccagtgccaaaaatgcca
ttagtagaaattatccgtggtgcaaaaacttctgataaaacaattaacgcggtagttgat
tacgcccttaaacttggcaagtcacctatcgttgttaacgattgccctggcttttttgta
aaccgagttttattcccttactttgcaggctttagcaaattagttgttgaaggcgctaac
tttgcaaaagtagataaagtaatggaaaacgtatttggctggccaatgggcccagcttac
ctacttgatgttgtaggtattgatacggcttaccattgtactggcgtaatggcagacggt
ttccctgagcgtatggcacgcgcagaaaaagatccggtgactgtttttgctaacgaaaaa
cgttttggtcaaaagaacaaagcaggtttttacaagtacgaaacagaccgtcgtggtcgt
cttaaaaaatcaagcgatgcaacagcagttgagctactagcgccaattactgatgcacct
aaagaatttgataaacaagaaattatcgaccgttgtatgatcccaatgatcaacgaagtg
cttctttgtttacaagaaggcattgttgcttctcctcaagaagctgatatggcccttgta
tacggcgttggtttccctccatttagaggcggcgcgttccgttacttagatcaaacaggt
ttagctaactttgttgcagcagcagacaaatatgctcacctaggtgcgatttaccaagta
tcagagcaaactcgcaaatgggccgaagaaggtcgtgttttctataaggtggaaggttaa
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