KEGG   Pseudoalteromonas sp. Xi13: EJ103_00540
Entry
EJ103_00540       CDS       T10490                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pxsi  Pseudoalteromonas sp. Xi13
Pathway
pxsi00300  Lysine biosynthesis
pxsi00470  D-Amino acid metabolism
pxsi01100  Metabolic pathways
pxsi01110  Biosynthesis of secondary metabolites
pxsi01120  Microbial metabolism in diverse environments
pxsi01230  Biosynthesis of amino acids
Module
pxsi_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pxsi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    EJ103_00540 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    EJ103_00540 (lysA)
Enzymes [BR:pxsi01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     EJ103_00540 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF1955
Other DBs
NCBI-ProteinID: AZN31287
LinkDB
Position
1:complement(107937..109190)
AA seq 417 aa
MDYFNYQNNQLFAEDVSIATIAQHYGTPCYVYSRATFERHYLAFANATKNHKSLVCYAVK
ANSNIAVLNILARLGSGFDIVSKGELARVIKAGGDASKVVFSGVAKTADEIAYALKLGIK
CFNVESASELERISEVACELNLEAPISIRVNPDIDAKTHPYISTGLKENKFGIDIQTAVS
VYQHAASLPGLKVTGVDCHIGSQLTEVKPFLEALDKLMALIDELKANGIELTHLDIGGGL
GVPYNDEQPPHPSEYAAQVTERLANYKHLELIFEPGRAIAANAGILVTQVEFIKQNQDKF
FAIVDAGMNDMLRPSLYQAWQKIIPVSVRDDDTPTHNFDIVGPVCETGDFLGKDRELALK
QGDLLAQRSAGAYGFTMSSNYNSRPRVAEIMVDGEQHHLIRQRETIESLYQGEKILP
NT seq 1254 nt   +upstreamnt  +downstreamnt
atggattattttaactatcaaaacaatcaattatttgccgaagatgtcagcattgccaca
attgctcagcactatggtacgccgtgttatgtgtactcgcgtgctacttttgagcgccat
tatttagcctttgcaaatgccactaaaaatcataaaagcttggtgtgctacgcagttaaa
gctaattctaatattgcagtattaaatatattagcgcgtttaggctcagggtttgacata
gtgtctaaaggtgagctggcgcgtgtaataaaagccggcggtgatgccagtaaagtggtg
ttttcaggtgtggctaaaaccgccgacgaaattgcttatgcactaaagttaggcattaaa
tgctttaacgttgaatcggcctcagagcttgagcgtatttctgaggtagcgtgcgagtta
aatttagaagcccctatttctattcgtgtaaaccctgatatagatgccaaaacacacccg
tatatttctaccggtttaaaagaaaacaaatttggtatcgatattcaaacggctgtgagc
gtttatcagcatgcggcgtctttaccaggtctaaaagtaacaggtgtagattgccacata
ggctcgcaattaactgaggttaaaccttttttagaagcgcttgataagctaatggcatta
atagatgagcttaaagcaaatggtattgagcttactcatttagatattggcggcgggtta
ggcgttccttataatgatgaacagcctcctcacccaagtgaatatgctgcgcaagttacc
gagcgcttagccaattacaaacaccttgagcttatttttgagccaggacgcgctatagcc
gctaatgctggaattttagtaacgcaggttgagtttattaagcaaaaccaagataaattt
tttgccattgtcgatgcgggtatgaacgacatgcttcgcccttcgctttatcaggcatgg
caaaaaatcattcctgtatcggtgcgcgatgacgacaccccaacacataactttgatatt
gtgggcccagtgtgcgaaaccggcgactttttaggaaaagaccgcgagctagcccttaaa
caaggcgacttattggcgcagcgaagtgctggtgcctatggttttacaatgagttcaaac
tacaactctcgcccacgcgtggccgaaataatggtagatggtgagcaacaccaccttatt
cgccaacgcgaaaccatcgagagcctttatcaaggtgagaaaattttaccataa

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