Pseudoalteromonas sp. Xi13: EJ103_00540
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Entry
EJ103_00540 CDS
T10490
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pxsi Pseudoalteromonas sp. Xi13
Pathway
pxsi00300
Lysine biosynthesis
pxsi00470
D-Amino acid metabolism
pxsi01100
Metabolic pathways
pxsi01110
Biosynthesis of secondary metabolites
pxsi01120
Microbial metabolism in diverse environments
pxsi01230
Biosynthesis of amino acids
Module
pxsi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pxsi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EJ103_00540 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EJ103_00540 (lysA)
Enzymes [BR:
pxsi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EJ103_00540 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
AZN31287
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Position
1:complement(107937..109190)
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AA seq
417 aa
AA seq
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MDYFNYQNNQLFAEDVSIATIAQHYGTPCYVYSRATFERHYLAFANATKNHKSLVCYAVK
ANSNIAVLNILARLGSGFDIVSKGELARVIKAGGDASKVVFSGVAKTADEIAYALKLGIK
CFNVESASELERISEVACELNLEAPISIRVNPDIDAKTHPYISTGLKENKFGIDIQTAVS
VYQHAASLPGLKVTGVDCHIGSQLTEVKPFLEALDKLMALIDELKANGIELTHLDIGGGL
GVPYNDEQPPHPSEYAAQVTERLANYKHLELIFEPGRAIAANAGILVTQVEFIKQNQDKF
FAIVDAGMNDMLRPSLYQAWQKIIPVSVRDDDTPTHNFDIVGPVCETGDFLGKDRELALK
QGDLLAQRSAGAYGFTMSSNYNSRPRVAEIMVDGEQHHLIRQRETIESLYQGEKILP
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggattattttaactatcaaaacaatcaattatttgccgaagatgtcagcattgccaca
attgctcagcactatggtacgccgtgttatgtgtactcgcgtgctacttttgagcgccat
tatttagcctttgcaaatgccactaaaaatcataaaagcttggtgtgctacgcagttaaa
gctaattctaatattgcagtattaaatatattagcgcgtttaggctcagggtttgacata
gtgtctaaaggtgagctggcgcgtgtaataaaagccggcggtgatgccagtaaagtggtg
ttttcaggtgtggctaaaaccgccgacgaaattgcttatgcactaaagttaggcattaaa
tgctttaacgttgaatcggcctcagagcttgagcgtatttctgaggtagcgtgcgagtta
aatttagaagcccctatttctattcgtgtaaaccctgatatagatgccaaaacacacccg
tatatttctaccggtttaaaagaaaacaaatttggtatcgatattcaaacggctgtgagc
gtttatcagcatgcggcgtctttaccaggtctaaaagtaacaggtgtagattgccacata
ggctcgcaattaactgaggttaaaccttttttagaagcgcttgataagctaatggcatta
atagatgagcttaaagcaaatggtattgagcttactcatttagatattggcggcgggtta
ggcgttccttataatgatgaacagcctcctcacccaagtgaatatgctgcgcaagttacc
gagcgcttagccaattacaaacaccttgagcttatttttgagccaggacgcgctatagcc
gctaatgctggaattttagtaacgcaggttgagtttattaagcaaaaccaagataaattt
tttgccattgtcgatgcgggtatgaacgacatgcttcgcccttcgctttatcaggcatgg
caaaaaatcattcctgtatcggtgcgcgatgacgacaccccaacacataactttgatatt
gtgggcccagtgtgcgaaaccggcgactttttaggaaaagaccgcgagctagcccttaaa
caaggcgacttattggcgcagcgaagtgctggtgcctatggttttacaatgagttcaaac
tacaactctcgcccacgcgtggccgaaataatggtagatggtgagcaacaccaccttatt
cgccaacgcgaaaccatcgagagcctttatcaaggtgagaaaattttaccataa
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