Pseudoalteromonas sp. Xi13: EJ103_01695
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Entry
EJ103_01695 CDS
T10490
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pxsi Pseudoalteromonas sp. Xi13
Pathway
pxsi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pxsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EJ103_01695 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxsi03400
]
EJ103_01695 (uvrA)
DNA repair and recombination proteins [BR:
pxsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EJ103_01695 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EJ103_01695 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_21
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
AAA_23
AAA_25
NACHT
Viral_helicase1
cobW
NTPase_1
DUF1924
DUF2972
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AZN34248
LinkDB
All DBs
Position
1:complement(376098..378917)
Genome browser
AA seq
939 aa
AA seq
DB search
MENIEVRGARTHNLKDISLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLMFARVGEPRC
PTHDLPLAAQTISQMVDTVLALPEGTKLMLLAPVVKDRKGEHVKLLEQLASQGYIRARID
GEVCDLSDPPTLELHKKHTIEVVVDRFKVKDGQQQRLAESFETALEMSGGVANVAYMDDS
TIEEMLFSANFACPTCGYAMTELEPRLFSFNNPAGACQSCDGLGVRQYFDPNRVVHNPEL
SLAGGAIKGWDKRSFYYFQMLQAVAEHYNFDLDVPFEKLAKESQKIILEGSGQTKIAFNY
RNDRGDLITRNHEFEGVLNNMNRRYRETESNSVREELAKYQTSQACPSCHGSRLRQEARH
VFIGQTNLPAITTMSIGEAMDFFEGLSLTGQKAQIAEKILKEIRDRLSFLINVGLNYLSL
ERSADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNDRLLQTLVHLRDLGNT
VIVVEHDEDAIRAADHIIDIGPGAGVHGGHIIAQGTRDDILATKDSVTGQFLSGVRKIEV
PQERNPTSEKWLELFGATGNNLKNVDLKIPFGLLTCITGVSGSGKSTLINDTLFKLAHTE
LNGATTAEAAPYKSISGLDHFDKVIDIDQSPIGRTPRSNPATYTGIFTGIRELFAGTQEA
RSRGYKVGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGARYNRETLEVQYK
GKNIHQVLEMTVEDAHDYFDKIPAIARKLKTLMDVGLSYIRLGQAATTLSGGEAQRVKLA
RELSKRDTGKTLYILDEPTTGLHFADIEQLLVVLHRLRDHGNTIVVIEHNLDVVKTADWV
VDLGPEGGAGGGEILIAGTPEEVAECERSHTGHYLKPLL
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacattgaagtccgaggcgcccgtacgcacaatttaaaagacatcagcctaacc
atcccacgtgataaattaattgttatcacaggcctatctggttcgggaaagtcatcactg
gcatttgatactttatatgcagaaggacagcgtcgttatgttgagtcactttctgcctac
gcaaggcaatttttatcgttaatggaaaagcctgacgttgatcatattgaaggcctctct
cccgccatttctattgagcaaaaatctacatcgcacaatcctcgctcaacagtgggtacc
attaccgaaatatacgattacttgcgtttaatgtttgcccgcgtgggcgaaccacgatgc
ccaacccacgacttaccacttgcagcacaaacaattagccaaatggttgataccgtttta
gcactgccagagggcactaagctgatgcttttagcgccagtggttaaagatcgtaaaggt
gagcacgttaaattacttgagcaacttgcaagccaaggctacattcgcgctcgtatagac
ggcgaagtatgcgacttatcagatccgccaacacttgagcttcataaaaaacacactatt
gaagtggttgttgaccgctttaaagtaaaagatggccaacagcagcgtttagcagagtcg
ttcgaaaccgcactagagatgtctggcggtgtggcaaatgtagcctacatggacgacagc
acgatagaagaaatgctgttctcggcaaattttgcctgccctacctgtggctacgcaatg
accgaattagaaccgcgtttattttcgtttaataaccctgccggtgcgtgtcaaagctgt
gatggtttaggcgtacgccaatactttgatcctaaccgtgtggtgcataacccagagctc
agccttgccggtggtgctattaaaggatgggataaacgcagcttttattattttcaaatg
ctacaggcggtcgccgagcactataactttgatttagatgtgccatttgaaaagctggct
aaagaatcgcaaaaaattattttagagggctcagggcaaacaaaaatagcctttaactac
cgtaacgacagaggcgatttaataacacgcaaccacgagtttgaaggcgtgttaaacaac
atgaaccgtcgctatcgcgaaactgagtcaaactcagtgcgtgaagagctcgctaaatat
caaactagccaagcgtgccctagttgtcatggctcgcgtttacgccaagaagcacgccac
gtatttataggtcaaacaaacctacctgctattacaactatgagtattggcgaagcgatg
gacttttttgaagggctatcactaacaggccaaaaagcccaaatagctgaaaaaatcctg
aaagaaattcgcgaccgcttatcgtttttaattaatgtagggcttaattacttatcgctt
gagcgcagtgccgataccctctccggtggtgaagcccagcgtattcgtttagccagccaa
ataggtgcaggccttgtaggcgtaatgtacgtactggatgaaccatcaattggtttacac
cagcgcgataacgaccgtttattacaaacattggtgcatttacgcgacttaggtaatacc
gttattgttgttgagcatgatgaagatgccattcgcgcagccgatcatattattgatatt
ggcccaggtgcgggtgtacacggcggccatattattgcacaaggtacacgtgacgatatt
ttagccactaaagactcggtaacgggccagtttttatcaggcgtgcgcaaaatagaagtg
ccacaagagcgtaacccaaccagcgaaaaatggcttgagctatttggtgccacagggaat
aacctaaaaaatgtagacttaaaaattccatttggcttattaacctgtattacaggggta
tcaggctcaggtaaatcaacgctcattaacgatacactctttaagcttgcgcataccgag
cttaacggcgcgaccacagcagaagccgcgccttacaagtcaattagtggccttgatcat
tttgacaaagtgattgatattgaccaaagcccaattggtcgtacaccgcgctcaaatcct
gcaacctacacaggtatttttaccggtattcgtgagttatttgcagggacacaagaagcc
cgctctcgcggctataaagtaggtcgctttagctttaacgttaaaggtggacgctgtgaa
gcctgtcaaggggatggtgtaattaaagtagaaatgcactttttacctgatgtatatgta
ccgtgtgatgtatgtaagggcgcgcgctataaccgcgaaaccttagaagtacaatacaaa
ggtaaaaacattcaccaagtgctcgaaatgaccgttgaagacgcgcacgactactttgat
aaaatacctgcaatagcgcgtaaacttaaaacgctaatggacgttggtttatcgtatatt
cgcctagggcaagctgctaccacgctctctggtggtgaagcacaacgtgtaaaactggct
cgtgagctttctaaacgcgatacaggtaaaacattgtatatacttgatgagccaacaacc
ggccttcactttgccgatattgaacaactacttgtggtattacatcgcctgcgcgatcat
ggtaataccattgtggtaattgagcataacttagatgtggttaaaaccgcagactgggtg
gttgatttaggccctgaagggggcgctgggggcggtgaaatactcattgcaggcacgcct
gaagaagtagccgaatgtgaacgctcgcatactgggcattacctaaagccattgctttaa
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