Pseudoalteromonas sp. Xi13: EJ103_02420
Help
Entry
EJ103_02420 CDS
T10490
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pxsi Pseudoalteromonas sp. Xi13
Pathway
pxsi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pxsi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EJ103_02420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxsi03019
]
EJ103_02420
03009 Ribosome biogenesis [BR:
pxsi03009
]
EJ103_02420
Messenger RNA biogenesis [BR:
pxsi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EJ103_02420
Ribosome biogenesis [BR:
pxsi03009
]
Eukaryotic type
Pre-60S particles
RNases
EJ103_02420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AZN31643
LinkDB
All DBs
Position
1:552884..553429
Genome browser
AA seq
181 aa
AA seq
DB search
MTINESNLIWLDLEMTGLEPATDKILEIATVVTDADLNILAEGPTIAIHQSDELLDGMDE
WCTTQHGKSGLTARCKASTYDEAYAVEQTLNFLKQWVPAGKSPMCGNSIGQDRRFMNKYM
RELEDFFHYRNLDVSTIKELARRWKPEVLEQVNKKGSHLALDDIKDSIMELKVYREKFFN
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgactattaatgaatctaatttaatttggcttgatctagaaatgactggacttgagccg
gccacagataaaatactcgaaattgcaacagtagtaactgatgccgatttaaatatactc
gcggaagggcctactatagcgattcaccaaagtgatgagctgttagatggcatggacgaa
tggtgtactacacagcatgggaaatcaggtctgactgctcgttgtaaagccagtacatat
gatgaagcttatgcggttgaacaaacgcttaattttttaaagcagtgggttcctgcgggt
aaatcaccgatgtgtggtaactcaataggtcaagacagacgctttatgaataagtatatg
cgcgagcttgaagacttttttcattatcgaaatttagatgtaagcacaattaaagagctt
gcccgacgttggaagcctgaggtactagaacaggtaaataaaaaaggctctcatttagct
ctcgatgacattaaagattctattatggaattaaaggtgtatagagaaaaattctttaat
ttgtaa
DBGET
integrated database retrieval system