KEGG   Pseudoalteromonas sp. Xi13: EJ103_02420
Entry
EJ103_02420       CDS       T10490                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pxsi  Pseudoalteromonas sp. Xi13
Pathway
pxsi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pxsi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    EJ103_02420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pxsi03019]
    EJ103_02420
   03009 Ribosome biogenesis [BR:pxsi03009]
    EJ103_02420
Messenger RNA biogenesis [BR:pxsi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EJ103_02420
Ribosome biogenesis [BR:pxsi03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    EJ103_02420
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: AZN31643
LinkDB
Position
1:552884..553429
AA seq 181 aa
MTINESNLIWLDLEMTGLEPATDKILEIATVVTDADLNILAEGPTIAIHQSDELLDGMDE
WCTTQHGKSGLTARCKASTYDEAYAVEQTLNFLKQWVPAGKSPMCGNSIGQDRRFMNKYM
RELEDFFHYRNLDVSTIKELARRWKPEVLEQVNKKGSHLALDDIKDSIMELKVYREKFFN
L
NT seq 546 nt   +upstreamnt  +downstreamnt
atgactattaatgaatctaatttaatttggcttgatctagaaatgactggacttgagccg
gccacagataaaatactcgaaattgcaacagtagtaactgatgccgatttaaatatactc
gcggaagggcctactatagcgattcaccaaagtgatgagctgttagatggcatggacgaa
tggtgtactacacagcatgggaaatcaggtctgactgctcgttgtaaagccagtacatat
gatgaagcttatgcggttgaacaaacgcttaattttttaaagcagtgggttcctgcgggt
aaatcaccgatgtgtggtaactcaataggtcaagacagacgctttatgaataagtatatg
cgcgagcttgaagacttttttcattatcgaaatttagatgtaagcacaattaaagagctt
gcccgacgttggaagcctgaggtactagaacaggtaaataaaaaaggctctcatttagct
ctcgatgacattaaagattctattatggaattaaaggtgtatagagaaaaattctttaat
ttgtaa

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