Pseudoalteromonas sp. Xi13: EJ103_04565
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Entry
EJ103_04565 CDS
T10490
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pxsi Pseudoalteromonas sp. Xi13
Brite
KEGG Orthology (KO) [BR:
pxsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxsi03400
]
EJ103_04565
Enzymes [BR:
pxsi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
EJ103_04565
DNA repair and recombination proteins [BR:
pxsi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
EJ103_04565
Prokaryotic type
EJ103_04565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AZN32036
LinkDB
All DBs
Position
1:complement(1017302..1018804)
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AA seq
500 aa
AA seq
DB search
MREKINIVWFKRDLRLSDHQPLKNAFSDDLPTLLLYNFEPLMLEDAHYNARHWCFVYQSI
GEINQQLTRYKATLYIFNQDMLTLLNTLNQTYQIANIFSHQEIGLNNTFERDKAVAIWCK
ANKVNWLESQTGGVIRGKKNRKDWNARWQQTMQAPIAIPNWKNIKTITLNNYQPPKLPDS
YTQNDDNFQVGGPLTAHTILQSFFAERGKGYQKGISSPSLSRIHCSRLSPYLAWGNISLK
QVYQTAIDVYHAKHPSKKGWKRPIAAFVSRLHWHCHFMQKFESESTMEFTALNAGYHQFP
YRNDDNVQHDIERWAQGQTGIPIIDACMRCLKTTGYINFRMRAMLVSFVTHHLNISWQQA
SLPLANYFLDFEPGIHYPQIQMQASVTGINTIRHYNPIKQSEDQDPTGAFIKKWCPELEK
LPTEYLHEPWQQTPMEALFNDFKLGEDYPEPMLDLTQASKQARERLWQYRERADVKRAIP
NILKKHVGLTRTQKNTTKSN
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaaaaaataaacatagtgtggtttaaacgcgatttacgccttagcgaccatcaa
ccacttaaaaatgcatttagtgatgatttacccacgttactgctatacaactttgagcca
ctaatgcttgaggatgcacattataatgcgcgccattggtgttttgtttatcaatcaata
ggcgaaataaatcagcagctaactcgctacaaagcaacgctgtatatttttaaccaagac
atgctgacactgttaaacacgcttaatcaaacataccaaatagcaaacatatttagccat
caagaaattggcttaaacaatacctttgagcgcgataaagccgttgctatatggtgtaaa
gctaacaaagttaactggcttgagtcacaaacgggcggcgttattcgtggcaaaaaaaac
cgtaaagattggaacgcacgctggcaacaaacaatgcaggcccctattgctattcctaat
tggaaaaacataaaaaccattacacttaataactaccaaccccctaaattacccgacagc
tacacgcaaaatgatgacaactttcaagttggtgggcctttaactgcgcacacaatattg
caaagcttttttgctgagcgcggtaagggatatcaaaaaggcatatctagccccagctta
agccgtattcattgctctaggctttcgccttatttagcgtggggtaatattagccttaaa
caggtttatcaaacggctattgatgtataccatgcaaaacacccaagcaaaaaaggatgg
aagcgcccgattgctgcatttgtatcgcgcttgcattggcactgccattttatgcaaaag
tttgaaagtgagagtacgatggaatttacagcgctcaatgcggggtatcatcagttccca
tatagaaacgatgacaacgtacaacacgatattgagcgctgggcacaaggccaaacgggt
atacctattattgatgcctgtatgcgctgcttaaaaaccacgggctatattaattttaga
atgcgcgctatgttggttagctttgtaacgcatcatttaaatataagctggcagcaggca
agcttacctttggcaaattactttttagactttgaacctggcattcattacccacaaata
caaatgcaggcctcagttacgggtattaacaccattaggcattacaacccaattaagcaa
tctgaagatcaagacccaaccggcgcctttattaaaaaatggtgccccgaacttgaaaag
ctgccgacagaatatttacacgagccttggcaacaaacaccaatggaagcgctgtttaac
gactttaaacttggtgaagactaccccgagcccatgcttgatttaactcaagcctccaaa
caagcgcgcgaacgtttatggcaataccgcgagcgcgccgatgttaaacgtgcaattcct
aacatattaaaaaagcatgtagggcttactcgcacacaaaaaaacaccacaaaaagtaat
taa
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