Pseudoalteromonas sp. Xi13: EJ103_05300
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Entry
EJ103_05300 CDS
T10490
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pxsi Pseudoalteromonas sp. Xi13
Brite
KEGG Orthology (KO) [BR:
pxsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pxsi03016
]
EJ103_05300 (truB)
Enzymes [BR:
pxsi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EJ103_05300 (truB)
Transfer RNA biogenesis [BR:
pxsi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EJ103_05300 (truB)
Prokaryotic type
EJ103_05300 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
T6SS_Vgr
Motif
Other DBs
NCBI-ProteinID:
AZN32176
LinkDB
All DBs
Position
1:1173617..1174561
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AA seq
314 aa
AA seq
DB search
MARRSKGRPIDGILLLNKPQGISSNKALQQAKGIYFAQKAGHTGALDPLATGMLPICFGE
ATKFTQFLLDTDKTYVVRAKLGERTTTSDSDGEIVSTKDVNVTIEQLKSEIAAFLGVSDQ
YPSMYSALKYEGKPLYKYAREGIEVPRKCRKINVFSLTLDEFDEQNNEVQMTAHVSKGTY
IRTIVDDLGENLGCGAHVIMLHRSAVGHYPADKMVSLEQLEALLAKAKEEDVAPSTYLDE
LLLPMDSALVDLPVVEITKEQGVAFSHGQAVVLGTTLPEGAIKVLADGVFIGTGERNPDG
HLKSKRGLSNQLPE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgcagtaaaggccgtccgattgatggtattttgttgttaaacaaacctcaa
ggcatttcatcgaacaaagccctacagcaagctaaaggtatttactttgcgcaaaaagca
gggcataccggtgcgctagacccactagcaacaggcatgctgcctatttgttttggtgag
gcgactaagtttactcaatttttgctcgacactgataaaacctacgtagtgcgtgctaaa
ttaggcgagcgtacaacaacatcagactctgacggcgaaattgttagcaccaaagatgtt
aatgtcactattgagcaactaaaaagcgaaattgcagcctttttaggtgtatcagatcag
tatccatcaatgtattcagcgcttaagtatgagggtaaacctttgtacaagtacgcacga
gaaggtattgaagtaccgcgtaaatgccgaaaaatcaacgtgtttagcttaacgctagat
gagtttgatgagcaaaacaacgaagtacaaatgaccgcgcatgtatcaaagggcacgtat
attcgtaccattgttgatgatttaggcgaaaacctaggctgtggcgcacatgtaattatg
ctgcaccgctcagcggttgggcattatcctgcagataaaatggtctctcttgaacagctt
gaggctctactagcgaaagctaaagaagaggatgttgcaccatctacttacctagatgag
ttgctattaccaatggatagcgccttggtagatttacctgtggttgaaataaccaaagag
cagggtgttgcgtttagtcatggccaagctgtggtgttaggcaccactttacctgaaggg
gcaattaaagtacttgctgatggtgtgtttattggcaccggtgagcgcaaccccgatgga
catttaaaatcaaagcgtggcttgtctaatcagcttccagagtaa
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