Pseudoalteromonas sp. Xi13: EJ103_05845
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Entry
EJ103_05845 CDS
T10490
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pxsi Pseudoalteromonas sp. Xi13
Pathway
pxsi03030
DNA replication
pxsi03430
Mismatch repair
pxsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pxsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EJ103_05845
03430 Mismatch repair
EJ103_05845
03440 Homologous recombination
EJ103_05845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxsi03032
]
EJ103_05845
03400 DNA repair and recombination proteins [BR:
pxsi03400
]
EJ103_05845
Enzymes [BR:
pxsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EJ103_05845
DNA replication proteins [BR:
pxsi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EJ103_05845
DNA repair and recombination proteins [BR:
pxsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EJ103_05845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
AZN32284
LinkDB
All DBs
Position
1:1296663..1297376
Genome browser
AA seq
237 aa
AA seq
DB search
MARRQIVLDTETTGIDPKQGHRIIEIGCVELINRRLTGNNFHVYINPQRSIEEEAIDVHG
ITNEFLRDKPLYRDIAQEFFDYIKGAELVIHNAPFDVGHMDNEFALLNQGYPNTHEYCQV
LDTLKMARDLHPGQKNNLDALCRRYDIDNAKRTLHGALLDSEILADVYLAMTGGQTKLNL
NQNKDDGSEQQTGGIRRLSSDRAPLVVLRANDAEQSAHEARLDLVDKEGGHCLWRAE
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtagacaaatagttttagatacagaaaccaccggcatagaccccaaacagggg
caccggattatagaaattgggtgtgtagaattaataaaccgacgtttaaccggtaataat
tttcatgtttacattaacccacaacgcagcattgaagaagaagcaatagatgttcacggt
attaccaacgagtttttacgtgataaaccactttatcgcgatatagcgcaagagtttttt
gactacattaaaggtgctgagcttgtaatacataacgccccgttcgatgtgggccatatg
gataacgagtttgcgctgcttaaccaaggctacccaaatacgcacgagtactgccaagtt
ctcgacacccttaaaatggcgcgtgacttgcatcctggtcaaaagaacaacctagatgct
ttgtgccgccgttacgatatagacaacgcaaaacgaacattacacggcgcattactggat
tctgaaattttagccgatgtttaccttgccatgactggcgggcaaaccaagctaaactta
aaccaaaataaagatgacggcagcgagcaacagactggtggcataagacgcttaagtagt
gaccgagcacctttagttgtattgcgcgcaaacgacgctgagcaaagcgcacacgaagca
cgactcgatcttgtagacaaagaaggcggccactgtttatggcgcgctgaataa
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